search for: runjags

Frank (or anyone else), can you offer any comments comparing runjags, R2jags, rjags ? I couldn't find any vignettes, nothing except a brief mention on Task Views. Kevin On Wed, Oct 7, 2009 at 7:48 AM, Frank E Harrell Jr <f.harrell@vanderbilt.edu > wrote: > Have you tried the rjags package which uses the jags system? It is much > more integrated...

...#################### ### code chunk number 2: data1 ################################################### library(foreign) therms <- na.omit(read.dta("http://quantoid.net/936/2008_difftherm.dta")) unstate <- unique(therms[,1]) therms$numstate <- match(therms$state, unstate) library(runjags) dat <- dump.format(list( N = nrow(therms), J=length(unstate), y = therms$difftherm, numstate = therms$numstate )) ################################################### ### code chunk number 3: exchange ################################################### exchange.mod <- "model{ for...

...for example in a classroom or computer lab) to undertake independent simulations or other long-running jobs that can be divided into replicate runs.? In addition to the documentation within the package, more information can be found at: http://www.math.smith.edu/xgrid On a related note, the "runjags" package provides similar functionality for Gibbs sampling. Happy simulating! Nick Nicholas Horton Department of Mathematics and Statistics Smith College Clark Science Center Northampton, MA 01063-0001 USA _______________________________________________ R-packages mailing list R-packages a...

...for example in a classroom or computer lab) to undertake independent simulations or other long-running jobs that can be divided into replicate runs.? In addition to the documentation within the package, more information can be found at: http://www.math.smith.edu/xgrid On a related note, the "runjags" package provides similar functionality for Gibbs sampling. Happy simulating! Nick Nicholas Horton Department of Mathematics and Statistics Smith College Clark Science Center Northampton, MA 01063-0001 USA _______________________________________________ R-packages mailing list R-packages a...

Hi all, I'd like to fit different models using a loop together with the jags package. to do this, I load the following packages "runjags", "R2jags" and "coda" and use the function "jags" to fit my models. The problem is that the following a windowx with the following message appear between each model fitting inside my loop : the following objects in .GlobalEnv will mask objects in the attached...

...Command actually quote the stdin argument! https://github.com/mllg/batchtools/commit/4a5818d70c82c8842c0b8bded224dbb423b79f33 - nat: R/cmtk.R, R/xformpoints.R; stdin is tempfile(...) - credentials: R/credential-api.R; stdin is passed as-is, tempfile() or "" in default arguments - runjags: R/setup.jags.jagsfile.R; stdin is constant "script.cmd" - m2r: R/m2.R; stdin is constant "" - scriptexec: R/scriptexec.R; stdin is passed as-is or default value retained - BioInstaller: inst/extdata/shiny/global_var.R; stdin is "" by default and passed as-is, ca...

...k (0.3), RcmdrPlugin.MAc (1.0.6), RcmdrPlugin.MAc (1.0.5), Rcpp (0.7.8), Rcpp (0.7.9), relations (0.5-7), reporttools (1.0.5), REQS (0.8-6), RFLPtools (1.1), RFOC (1.0-9), RGtk2DfEdit (0.5.4), rimage (0.5-8.1), rms (2.2-0), RQDA (0.1-9), Rsolnp (1.0-2), rsprng (1.0), RSQLite (0.8-4), RTOMO (1.0-7), runjags (0.9.6-3), s20x (3.1-7), sandwich (2.2-6), sbgcop (0.975), sdef (1.5), seacarb (2.3.2), season (0.2-4), seqinr (2.0-8), sfsmisc (1.0-11), SGP (0.0-5), signal (0.6-1), simecol (0.6-10), simPopulation (0.1.1), SkewHyperbolic (0.2-0), sm (2.2-4), snowfall (1.83), sp (0.9-61), spatstat (1.18-0), spBaye...

CRAN (and crantastic) updates this week New packages ------------ * bdoc (1.0) Michael Anderson http://crantastic.org/packages/bdoc This package contains a function that will classify DNA barcodes as well as a few test and reference data sets. * bdsmatrix (1.0) Terry Therneau http://crantastic.org/packages/bdsmatrix This is a special case of sparse matrices, used by coxme and

...ms (3.0-0), RNetCDF (1.2-1.1), robCompositions (1.4.2), robfilter (2.6.1), robust (0.3-11), rpartOrdinal (2.0.2), RPPanalyzer (1.0.3), rpvm (1.0-4), rrcov (1.0-01), RSAGA (0.9-7), Rserve (0.6-1), RSiena (1.0.11.110), Rsolnp (1.0-4), RSQLite (0.9-1), rstream (1.2.5), Rsymphony (0.1-11), rtv (0.4.0), runjags (0.9.7-1), Runuran (0.14.0), Rvmmin (0.92), samplesize (0.1-7), samr (1.28), sapa (1.0-3), scaleboot (0.3-3), sciplot (1.0-7), scout (1.0.2), scrime (1.2.0), sdcTable (0.0.12), SDMTools (1.1), seacarb (2.3.4), seas (0.3-9), seewave (1.5.8), segclust (0.76), segmented (0.2-7.1), SEL (1.0-2), sem (0....