Displaying 1 result from an estimated 1 matches for "rtmpkujvlz".
2010 Jun 07
0
exepath error in seqaln
...ch appreciated.
> aa<-read.fasta("./R/test.fa", rm.dup=F)
> aln<-seqaln(aa, exepath="/Users/Fan/Desktop/muscle/src/muscle", file="aa_muscle.fa", protein=T)
/Users/Fan/Desktop/muscle/src/musclemuscle -in /var/folders/v9/v95dzKP2E9SAkmd7m4T8dE+++TQ/-Tmp-//RtmpKUJVlZ/file618fb492 -out aa_muscle.fa -stable -seqtype protein/bin/sh: /Users/Fan/Desktop/muscle/src/musclemuscle: No such file or directory
Error in file(file, "r") : cannot open the connection
In addition: Warning message:
In file(file, "r") :
cannot open file 'aa_muscle.f...