search for: rshepard

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2003 Nov 18
1
compile failure on 3.0.0 and 3.0.1pre3
I have installed Suse on an IBM as400 (powerpcc). This is SuSe 8.0 gcc 3.2 and with both samba 3.0.0 and 3.0.1pre3 I get this error message on the compile. (configure runs fine. make Using FLAGS = -g -O2 -I./popt -Iinclude -I/home/rshepard/samba-3.0.0/source/include -I/home/rshepard/samba-3.0.0/source/ubiqx -I/home/rshepard/samba-3.0.0/source/smbwrapper -I. -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -I/home/rshepard/samba-3.0.0/source LIBS = -lcrypt -lattr -lresolv -lnsl -ldl LDSHFLAGS = -shared LDFLAGS = Ge...
2011 Aug 30
2
RPostgreSQL Loading Issues
...using my reference books but I'm missing something simple. Running R-2.13.1 on Slackware-13.1. Trying to invoke RPostgreSQL so I can copy data from a postgres table to an R data-frame. I installed RPostgreSQL and the library() command shows it's present: Packages in library '/home/rshepard/R/i486-slackware-linux-gnu-library/2.13': DBI R Database Interface RPostgreSQL R interface to the PostgreSQL database system Yet, trying to load it fails: > library(RPostgreSQL) Loading required package: DBI Error in dyn.load(file, DLLpath = DLLpath, ......
1999 Sep 01
1
Installation test fails: 2.04b
...ba-2.04b was installed from the rpm. I'm using Carter and Sharpe's "Teach Yourself Samba in 24 Hours" as my guide. On page 59, they suggest testing the installation to see if the shares defined in /etc/smb.conf are correct. Here is what I run and the results returned: [root@salmo rshepard]# /usr/bin/smbclient -L salmo -N Added interface ip=192.168.55.1 bcast=192.168.55.255 nmask=255.255.255.0 session setup failed: ERRSRV - ERRbadpw (Bad password - name/password pair in a Tree Connect or Session Setup are invalid.) The win98 virtual machine is not running; makes no difference if i...
2012 Dec 05
4
Changing data frame column headings
I have a reshaped data frame with value column headings concatenated from two column headings in the melted data frame. I want to change all 56 headings in a single command, but 'names' allows me to change only one at a time. In Hadley's 2007 article on reshape in the Journal of Statistical Software he mentions a 'rename' function, but I cannot find that. Is there a way to
2012 Apr 24
2
Errors Updating Libraries (2.15)
...d have run into an issue upgrading libraries that I've not had in previous version upgrades. For example, trying to install reshape2 for 2.15 throws errors and I don't see what to change to over come the problem: > install.packages("reshape2") Installing package(s) into ?/home/rshepard/R/i486-slackware-linux-gnu-library/2.15? (as ?lib? is unspecified) also installing the dependencies ?plyr?, ?stringr? trying URL 'http://ftp.osuosl.org/pub/cran/src/contrib/plyr_1.7.1.tar.gz' Content type 'application/x-gzip' length 367683 bytes (359 Kb) opened URL ================...
2011 Oct 04
3
How to subset() from data frame using specific rows
I have a data frame called chemdata with this structure: > str(chemdata) 'data.frame': 14886 obs. of 4 variables: $ site : Factor w/ 148 levels "BC-0.5","BC-1",..: 104 145 126 115 114 128 124 2 3 3 ... $ sampdate: Date, format: "1996-12-27" "1996-08-22" ... $ param : Factor w/ 8 levels "As","Ca","Cl",..:
2012 Aug 07
3
reshape2's dcast() Adds NAs to Data Frame
I need to understand how and why dcast() adds NAs to a data frame that contained no missing values. The database table of chemical concentrations has all missing values removed because they cannot contribute to data analyses. The structure of the R data frame of these data have no NA values, and neither does the data frame resulting from applying the reshape2 melt() function to it. However,
2012 Jul 18
2
cenbox(): Changing Default x-axis Group Labels
I've looked at the lattice book and the 'R Graphics Cookbook' without seeing how to change the labels along the x axis for groups in a box plot, specifically cenbox(). The attached example has a main and axes labels with default group labels. Please point me to a reference on how I can change 'FALSE' and 'TRUE' to something more easily understood by viewers. TIA,
2018 Mar 14
1
Fwd: Learning advanced R
...nline: http://r4ds.had.co.nz/ > github: https://github.com/hadley/r4ds > 2. "Advanced R" > online: https://adv-r.hadley.nz/ > github: https://github.com/hadley/adv-r > > Best, > Eric > > > > On Wed, Mar 14, 2018 at 12:13 AM, Rich Shepard <rshepard at appl-ecosys.com> > wrote: > > > On Tue, 13 Mar 2018, Mark Leeds wrote: > > > > See Hadley's advanced R > >> > > > > +1 A very well writte, highly useful book. Recommended. > > > > Rich > > > > > > _______________...
2013 Feb 04
3
Modifying Package Data
The bio.infer package contains a data frame /usr/lib/R/library/bio.infer/data/itis.ttable.rda that needs to be modified. After loading the bio.infer package and attaching the data frame with the data() function, I wrote the data frame to a text file. After adding another row to the data frame I applied read.table() to create a data frame, but it's in my pwd, not the R library data
2012 Jul 03
2
NADA Data Frame Format: Wide or Long?
I have water chemistry data with censored values (i.e., those less than reporting levels) in a data frame with a narrow (i.e., database table) format. The structure is: $ site : Factor w/ 64 levels "D-1","D-2","D-3",..: 1 1 1 1 1 1 1 1 ... $ sampdate: Date, format: "2007-12-12" "2007-12-12" ... $ preeq0 : logi TRUE TRUE TRUE TRUE TRUE
2013 Jan 18
3
longitudinal study
Hello R user, I have a data set from a longitudinal study ( sample below) where subjects are followed over time. Second column (status) contains info about if subject is dead or still in the study and third column is time measured in the week. Here is what I need: if status is not dead or unknown take the last week, if status is dead or unknown I need to have corresponding week. Desired resulst:
2018 Mar 14
0
Fwd: Learning advanced R
...ub: https://github.com/hadley/r4ds >> 2. "Advanced R" >> online: https://adv-r.hadley.nz/ >> github: https://github.com/hadley/adv-r >> >> Best, >> Eric >> >> >> >> On Wed, Mar 14, 2018 at 12:13 AM, Rich Shepard ><rshepard at appl-ecosys.com> >> wrote: >> >> > On Tue, 13 Mar 2018, Mark Leeds wrote: >> > >> > See Hadley's advanced R >> >> >> > >> > +1 A very well writte, highly useful book. Recommended. >> > >> > Rich >&...
2024 Jan 22
2
Use of geometric mean .. in good data analysis
...dvice and dig into the literature: it's one of the many areas of "data science" where seemingly simple but pervasive questions require complex answers. And, again, heed my personal caveats. Thus endeth my rant. Cheers to all, Bert On Mon, Jan 22, 2024 at 9:29?AM Rich Shepard <rshepard at appl-ecosys.com> wrote: > On Mon, 22 Jan 2024, Martin Maechler wrote: > > > I think it is a good question, not really only about geo-chemistry, but > > about statistics in applied sciences (and engineering for that matter). > > > John W Tukey (and several other of...
2012 Aug 07
3
NADA Package: Referencing Data Frame Columns
The sample data sets that come with the NADA package are limited to one or two variables and a censored measurement indicator column. I try to mimic examples using my data but keep missing the target. My water chemistry data is available in two formats: long (as seen in a database table) and wide (as seen in a spreadsheet). The two structures are: str(chem) 'data.frame': 65349 obs. of
2024 Jan 22
1
Use of geometric mean for geochemical concentrations
better posted on r-sig-ecology? -- or maybe even stack exchange? Cheers, Bert On Mon, Jan 22, 2024 at 7:45?AM Rich Shepard <rshepard at appl-ecosys.com> wrote: > A statistical question, not specific to R. > > I'm asking for a pointer for a source of definitive descriptions of what > types of data are best summarized by the arithmetic, geometric, and > harmonic > means. > > As an aquatic ecologist...
2024 Apr 08
1
Building R-4,3,3 fails
I've been building R versions for years with no issues. Now I'm trying to build R-4.3.3 on Slackware64-15.0 (fully patched) with TeXLive2024 (fully patched) installed. The error occurs building a vignette. Is this mail list the appropriate place to ask for help or should I post the request on stackoverflow.com? TIA, Rich
2024 Apr 08
1
Building R-4,3,3 fails
Hello Rich, ? Mon, 8 Apr 2024 11:32:43 -0700 (PDT) Rich Shepard <rshepard at appl-ecosys.com> ?????: > I've been building R versions for years with no issues. Now I'm > trying to build R-4.3.3 on Slackware64-15.0 (fully patched) with > TeXLive2024 (fully patched) installed. The error occurs building a > vignette. Questions about building R do get...
2024 Apr 08
1
Building R-4,3,3 fails
On Mon, 8 Apr 2024, Ivan Krylov wrote: > Questions about building R do get asked here and R-devel. Since you're > compiling a released version of R and we don't have an R-SIG-Slackware > mailing list, R-help sounds like the right place. Ivan, Okay: > What are the last lines of the build log, containing the error message? If > it's a LaTeX error, it may be that you
2024 Apr 08
1
Building R-4,3,3 fails
? Mon, 8 Apr 2024 11:51:42 -0700 (PDT) Rich Shepard <rshepard at appl-ecosys.com> ?????: > processing 'reshape.Rnw' > Error: compiling TeX file 'reshape.tex' failed with message: > Running 'texi2dvi' on 'reshape.tex' failed. > Messages: > /usr/bin/texi2dvi: TeX neither supports -recorder nor outputs > \ope...