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2017 Dec 10
2
Confidence intervals around the MIC (Maximal information coefficient)
Hi Rui,
Many thanks. The R code works BUT the results I get are quite weird I guess !
MIC = 0.2650
Normal 95% CI = (0.9614, 1.0398)
The MIC is not inside the confidence intervals !
Is there something wrong in the R code ?
Here is the reproducible example :
##########
C=c(2,4,5,6,3,4,5,7,8,7,6,5,6,7,7,8,5,4,3,2)
D=c(3,5,4,6,7,2,3,1,2,4,5,4,6,4,5,4,3,2,8,9)
library(minerva)
mine(C,D)$MIC
2017 Jun 06
3
Release 3.11.1: Scheduled for 20th of June
...are any specific
call outs for 3.11 beyond bugs, please update the review, or leave a
comment in the review, for us to pick it up
Thanks,
Shyam/Kaushal
[1] Release bug tracker:
https://bugzilla.redhat.com/show_bug.cgi?id=glusterfs-3.11.1
[2] 3.11 review dashboard:
https://review.gluster.org/#/projects/glusterfs,dashboards/dashboard:3-11-dashboard
[3] Release notes WIP: https://review.gluster.org/17480
[4] Release calendar: https://www.gluster.org/community/release-schedule/
2017 Dec 10
0
Confidence intervals around the MIC (Maximal information coefficient)
You need:
myCor <- function(data, index){
mine(data[index, ])$MIC[1, 2]
}
results=boot(data = cbind(C,D), statistic = myCor, R = 2000)
boot.ci(results,type="all")
Look at the differences between:
mine(C, D)
and
mine(cbind(C, D))
The first returns a value, the second returns a symmetric matrix. Just like cor()
David L. Carlson
Department of Anthropology
Texas A&M
2017 Oct 22
2
Add a vertical line and some values on a plot
Dear R-experts,
Here below is my code,
I would like to add a vertical line on my plot, showing the median and I would like to place some values on this graph as well, i.e. 4.3 and -8.4. How can I do ?
Many thanks for your reply.
A=c(1,2.3,4,3.5,4.3,2.5,6.3,-0.1,-1.5,3.7,-2.3,-3.5,5.4,3.2, -10.5,-8.4,-9.4)
d <- density(A)
plot(d)
median(A)
2017 Oct 22
0
Add a vertical line and some values on a plot
Hello,
After the plot just do
abline(v = median(A))
As for how to plot points, see, well, ?points().
Hope this helps,
Rui Barradas
Em 22-10-2017 16:33, varin sacha via R-help escreveu:
> Dear R-experts,
>
> Here below is my code,
> I would like to add a vertical line on my plot, showing the median and I would like to place some values on this graph as well, i.e. 4.3 and -8.4. How
2017 Jun 20
1
[Gluster-Maintainers] Release 3.11.1: Scheduled for 20th of June
..., please update the review, or leave a
> comment in the review, for us to pick it up
>
> Thanks,
> Shyam/Kaushal
>
> [1] Release bug tracker: https://bugzilla.redhat.com/sh
> ow_bug.cgi?id=glusterfs-3.11.1
>
> [2] 3.11 review dashboard: https://review.gluster.org/#/p
> rojects/glusterfs,dashboards/dashboard:3-11-dashboard
>
> [3] Release notes WIP: https://review.gluster.org/17480
>
> [4] Release calendar: https://www.gluster.org/community/release-schedule/
> _______________________________________________
> maintainers mailing list
> maintainers at...
2017 Dec 10
0
Confidence intervals around the MIC (Maximal information coefficient)
Hello,
First of all, when I tried to use function mic I got an error.
mic(cbind(C, D))
Error in mic(cbind(C, D)) : could not find function "mic"
So I've changed your function myCor and all went well, with a warning
relative to BCa intervals.
myCor <- function(data, index){
mine(data[index, ])$MIC
}
results=boot(data = cbind(C,D), statistic = myCor, R = 2000)
2006 Jan 12
4
edit.data.frame
Dear list,
Sometimes I have huge data.frames and the small spreadsheetlike
edit.data.frame is quite handy to get an overview of the data. However,
when I close the editor all data are rolled over the console window,
which takes time and clutters the window. Is there a way to avoid this?
Fredrik
2017 Dec 10
2
Confidence intervals around the MIC (Maximal information coefficient)
Dear R-Experts,
Here below is my R code (reproducible example) to calculate the confidence intervals around the spearman coefficient.
##########
C=c(2,4,5,6,3,4,5,7,8,7,6,5,6,7,7,8,5,4,3,2)
D=c(3,5,4,6,7,2,3,1,2,4,5,4,6,4,5,4,3,2,8,9)
cor(C,D,method= "spearman")
library(boot)
myCor=function(data,index){
cor(data[index, ])[1,2]
}
results=boot(data=cbind(C,D),statistic=myCor, R=2000)
2017 May 08
2
Add more projects into Git monorepo
...o date?
> - Submodule repo has been pushed with -f.
>
> Rebasing to new branch(es) will take a few minutes. Please be patient.
>
> Thanks, Takumi
>
> On Mon, May 1, 2017 at 11:27 PM NAKAMURA Takumi <geek4civic at gmail.com>
> wrote:
>
>> I am planing to add projects into https://github.com/llvm-
>> project/llvm-project in near future, possibly this week.
>>
>> Before doing that, I would like to ask users of it.
>> 1st option is my preference in each paragraph. Let me know if you have
>> other suggestions.
>>
>> * What...
2016 Dec 15
2
Debug Locations for Optimized Code
----- Original Message -----
> From: "Andrea Di Biagio" <andrea.dibiagio at gmail.com>
> To: "Paul Robinson" <paul.robinson at sony.com>
> Cc: "Hal Finkel" <hfinkel at anl.gov>, "David Blaikie"
> <dblaikie at gmail.com>, llvm-dev at lists.llvm.org
> Sent: Thursday, December 15, 2016 9:05:00 AM
> Subject: Re:
2017 Aug 03
2
fatal error: clang/Basic/Version.inc: No such file or directory
...wing commands.
svn co http://llvm.org/svn/llvm-project/llvm/trunk llvm
cd llvm/tools
svn co http://llvm.org/svn/llvm-project/cfe/trunk clang
svn co http://llvm.org/svn/llvm-project/polly/trunk polly
cd clang/tools
svn co http://llvm.org/svn/llvm-project/clang-tools-extra/trunk/ extra
cd ../../../projects
svn co http://llvm.org/svn/llvm-project/compiler-rt/trunk compiler-rt
svn co http://llvm.org/svn/llvm-project/openmp/trunk openmp
svn co http://llvm.org/svn/llvm-project/lldb/trunk lldb
svn co https://github.com/clang-ykt/openmp libomptarget
cd ../..
rm -r build
mkdir build
cd build
cmake -DCMAKE_...