Displaying 1 result from an estimated 1 matches for "rnorvegicus_gene_ensembl".
2007 Jan 26
0
[BioC] problem with biomaRt getHomolog function
...oth the id you
use to query and the ids in the result of the query.
Here's an example:
rat.entrezgene.ID=c("24842","83502","24205")
mouse.mart <- useMart("ensembl","mmusculus_gene_ensembl")
rat.mart<- useMart("ensembl", "rnorvegicus_gene_ensembl")
mouse.homolog<-getHomolog(id =rat.entrezgene.ID, from.mart =
rat.mart,from.type = "entrezgene",to.type="entrezgene",
to.mart=mouse.mart)
> mouse.homolog
V1 V2
1 24842 22059
2 24205 11789
3 24205 NA
4 83502 12550
best,
Steffen
Kimpel, Mark William wro...