Displaying 3 results from an estimated 3 matches for "rnadeg".
2007 Feb 26
1
PlotAffyRNAdeg on Estrogen Data
Hi everyone,
I'm trying to generate an RNA degradation plot of the Estrogen example
data plot, but seem to get an error. I've tried defining an ylim value,
ylim=c(0,30) , but it doesn't seem to work either.
My code is as follows:
> RNAdeg<-AffyRNAdeg(Data)
> png(DegLoc, width=720, height=720)
> par(ann=FALSE)
> par(mar=c(3,3,0.1,0.1))
> plotAffyRNAdeg(RNAdeg,col=cols, cex.axis=1.2)
Error in plot.window(xlim, ylim, log, asp, ...) :
need finite 'ylim' values
> dev.off()
null device...
2006 Jun 19
2
Nested variance-covariance matrix in Multilevel model
...ameters: the compound symmetry parameter delta; the variance of
random effect sigma^2g; and the residual variance sigma^2. I have
formulas for the submatrices Lambda,Delta1 and Delta2 which I can't
really paste in here.
The SAS code dealing with this model is the following:
proc mixed data=rnadeg.pnau;
title 'CV structure for PNAU';
class probepos probeno end probe pixelid newprobeid;
model logPM=end logpgc / ddfm=satterth;
random probeno newprobeid / subject=probe type=cs;
lsmeans end / diff cl; run;
Any ideas are appreciated a lot since I am kind of stuck at this point.
Thank yo...
2007 Apr 26
2
SweaveInput and absolute paths
Hi,
Is there a way to turn off the automatic inclusion of "./" at the
beginning of a path specified in an \SweaveInput{} instruction?
I'd like to create some reusable "template modules" of Sweave code and
put them in a standard directory like
/Resources/Affymetrix
Then the corresponding file that uses one of these would include a
command like