search for: resumri

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2005 May 09
1
bootstap and lme4
Hi, I am trying to get bootstrap confidence intervals on variance components and related statistics. To calculate the variance components I use the package lme4. > off.fun <- function(data, i){ d <- data[i,] lme1<- lmer(y ~ trt + (trt-1|group), d) VarCorr(lme1)@reSumry$group[2,1] #just as an example } > off.boot <- boot(data=data.sim, statistic=off.fun, R=100) If
2005 Jun 24
1
lme4 extracting individual variance components
Hi, For further calculations I need to extract indivdual Variances of different random effects from a fitted model. I found out how to extract the correlations (VarCorr(m1)@reSumry$group1) but I was not able to find a way to extract the other components individually. To extract the Residuals I tried: (ranef(m1)@ stdErr) which unfortunately did not work. Thank you very much for your help!
2004 Jul 06
2
lme: extract variance estimate
For a Monte Carlo study I need to extract from an lme model the estimated standard deviation of a random effect and store it in a vector. If I do a print() or summary() on the model, the number I need is displayed in the Console [it's the 0.1590195 in the output below] >print(fit) >Linear mixed-effects model fit by maximum likelihood > Data: datag2 > Log-likelihood: