search for: recommended

Dear helpers, I can create a vector with the priority of the packages that came with R, like this: > installed.packages()[,"Priority"]->my.vector > my.vector base boot class cluster codetools "base" "recommended" "recommended" "recommended" "recommended" compiler datasets foreign graphics grDevices "base" "base" "recommended" "base" "base" grid KernSmooth...

...seeing as there wasn't an rpm for this OS on CRAN yet I thought it was about time I had a go at compiling R myself. Having run into the X11 problem I switched to trying to install R-patched. I followed the instructions in the R Installation & Admin manual to download the sources of the Recommended packages and place the files in R_HOME/src/library/Recommended. ./configure worked fine so I progressed to make, which has hit upon this error when the process arrived at the Recommended packages: make[2]: Leaving directory `/home/gavin/tmp/R-patched/src/library' make[2]: Entering directory...

Hi, I am building 2.1.0 (re-release version, if that matters) on a Windows XP machine. Following the instructions 3.1 "Building from source" in R-admin.html, I managed to get up to 3.1.6. But when I try to build the recommended packages, I get C:\hiro\codes\proj\R-2.1.0\src\gnuwin32>make recommended --- Unpacking recommended packages ---- VR make[1]: *** No rule to make target `../library/boot/DESCRIPTION'. Stop. make: *** [unpack-recommended] Error 1 What did I do wrong? In /library/Recommended I do see boot_1....

...with installing R on Solaris. Has anyone seen a similar issue? I don't find any hits on the search engines. Thanks. Environment: SunOS xxxx 5.10 Generic_118822-25 sun4u sparc SUNW,Sun-Fire-280R During the installation/compilation of R-2.10.1 I get the following error: begin installing recommended package boot ERROR: cannot extract package from 'boot.tgz' *** Error code 1 The following command caused the error: MAKE="make" R_LIBS= ../../../bin/R CMD INSTALL --no-lock -l "../../../library" boot.tgz > boot.ts.out 2>&1 || (cat boot.ts.out && exit 1)...

libguestfs usually needs qemu. However it only requires an emulator for the same architecture, not for all architectures. libvirt-daemon-kvm pulls in qemu which pulls in emulators for all architectures, as well as a bunch of other stuff we don't need at all like network interface support and nwfilter. There are no Fedora TCG-only arches, so drop the conditional section. I also made support

R 2.10.1 is used in the Sage maths project. Several recommended packages (Matrix, class, mgcv, nnet, rpart, spatial, and survival) are failing to build on Solaris 10 (SPARC). We would like to be able to get a list of the recommended packages for R 2.10.1, but ideally via a call to R, so it is not necessary to update that list every time a new version of R...

...gfortran -g -O C++ compiler: g++ -g -O2 Fortran 90/95 compiler: gfortran -g -O Obj-C compiler: Interfaces supported: X11 External libraries: readline, ICU Additional capabilities: NLS Options enabled: shared BLAS, R profiling, Java Recommended packages: yes Then sudo make stops near the end with: writing package indices make[3]: Entering directory `/home/kjetil/R/Rbuilddir/src/library' make[3]: Leaving directory `/home/kjetil/R/Rbuilddir/src/library' make[2]: Leaving directory `/home/kjetil/R/Rbuilddir/src/library' ma...

...>>>>> on Fri, 26 Apr 2024 11:55:36 +0200 writes: > I don't know if this is a bug, but it is certainly weird. AFAICT R > 4.4.0 has Matrix 1.7-0. Yes, it *is* available from CRAN: You can see it when looking into the 4.4.0/ , specifically the 4.4.0/Recommended/ sub directory. Recommended packages should be built as part of R unless *you* really want to *not* get them by choosing at configure time, not to get them via extra flag --without-recommended-packages. So, well, you got what you wanted. > However, currently CRAN has > Package:...

I need to recommend some backup options for a web server running CentOS 4.1. The client prefers using a tape drive as their backup device and has access to safe offsite storage. I was thinking of system backups weekly and differential backups nightly but don't know what software to recommend for the differential b/u's. For full backups I can just schedule a tar and compress using

.... David Kirkby wrote: >> >> On 06/12/10 05:27 PM, Douglas Bates wrote: >>> >>> On Sat, Jun 12, 2010 at 8:37 AM, Dr. David Kirkby >>> <david.kirkby at onetel.net> wrote: >>>> >>>> R 2.10.1 is used in the Sage maths project. Several recommended packages >>>> (Matrix, class, mgcv, nnet, rpart, spatial, and survival) are failing to >>>> build on Solaris 10 (SPARC). >>> >>> Have you checked the dependencies for those packages? Some require GNU >>> make. >> >> We used GNU make. &g...

...its increased flexibility, in which case they will rejoice." If your favorite tagging tool is completely free-form (e.g. foobar2000), then this recommendation provides no more flexibility over what is already there; it merely provides a suggested structure for tags. I also fail to see how a recommended tag set would be cause for rejoicing, but... The note on character encoding, in my opinion, is misplaced; it should go in an appendix at the bottom of the document on how to deal with corner cases that manifest themselves largely in East Asian languages. Further, UTF-8 is the only allowed encoding...

Hi, Trying to compile one of the latest snapshot tarballs of R-devel gives me the following error (64-bit openSUSE 10.3): ... make[2]: Entering directory `/loc/home/biocbuild/bbs-2.4-bioc/R/src/library/Recommended' make[2]: *** No rule to make target `VR.ts', needed by `stamp-recommended'. Stop. make[2]: Leaving directory `/loc/home/biocbuild/bbs-2.4-bioc/R/src/library/Recommended' make[1]: *** [recommended-packages] Error 2 make[1]: Leaving directory `/loc/home/biocbuild/b...

...e: ... >>> Building/Updating help pages for package 'tcltk' Formats: text html latex example make[2]: Leaving directory `/usr/src/R/R-2.9.1/src/library' make[1]: Leaving directory `/usr/src/R/R-2.9.1/src/library' make[1]: Entering directory `/usr/src/R/R-2.9.1/src/library/Recommended' make[2]: Entering directory `/usr/src/R/R-2.9.1/src/library/Recommended' begin installing recommended package VR Error in library("Hmisc", verbose = FALSE) : there is no package called 'Hmisc' Execution halted make[2]: *** [VR.ts] Error 1 make[2]: Leaving directory `/usr...

...g++ -g -O2 Fortran 90/95 compiler: gfortran -g -O2 Obj-C compiler: gcc -g -O2 Interfaces supported: X11, tcltk External libraries: readline Additional capabilities: PNG, JPEG, iconv, MBCS, NLS Options enabled: shared BLAS, R profiling, Java Recommended packages: yes ====================== MAKE ======================= hpages at wilson1:~/R-2.6.broken> make [...] make[1]: Entering directory `/home/hpages/R-2.6.broken/src/library/Recommended' make[2]: Entering directory `/home/hpages/R-2.6.broken/src/library/Recommended' make[2]:...

Good day all, I have been searching on google for the recommended repo for php 5.2.3 + for centos... I saw at one point it was in the testing repo, but was pulled due to no one testing it. Is there a recommended repo that people feel is safe for a CentOS 5.x to get php 5.23 + ? I know i can compile and install, but i like to keep as "vanilla" a...

...rent, standard debian stable, I added deb http://cran.R-project.org/bin/linux/debian stable/ to /apt/sources.list to get the current backport stable distro. When I installed r-base, apt-get wanted to remove all my previous r-cran-* packages and I let it, but encountered conflicts with things in r-recommended that I've been unable to resolve. It first showed up as (complete transcript below): dpkg: r-cran-foreign: dependency problems, but removing anyway as you request: r-recommended depends on r-cran-foreign (>= 0.7-2). Removing r-cran-foreign ... ----- transcript ------ euclid: ~ # su - r...

When I try to install R-patched of January 26 on my linux (fedora core 1, with openmosix kernel) box, make fails in the first recommended package with the message tkStartGUI text html latex tkpager text html latex make[2]: Leaving directory `/home/setzer/newstuff/R-patched/src/library' make[2]: Entering directory `/home/setzer/newstuff/R-patched/src/library' b...

I don't know if this is a bug, but it is certainly weird. AFAICT R 4.4.0 has Matrix 1.7-0. However, currently CRAN has Package: Matrix Version: 1.6-5 Priority: recommended Depends: R (>= 3.5.0), methods ... (plus another version for R >= 4.5.0 only). Which has some weird consequences, e.g. if I have an R 4.4.0 installation without the recommended packages, I don't have a way of installing Matrix 1.7-0. Whereas R 4.4.0 installations with recommended packag...

Hi When attempting to install R in version 2.15 (for testing purposes) on a clean Ubuntu 12.04 machine from the CRAN Ubuntu repository, I can't seem to install r-recommended: + sudo apt-get install --no-install-recommends r-base-dev=2.15.3-1precise0precise1 r-base-core=2.15.3-1precise0precise1 r-recommended=2.15.3-1precise0precise1 qpdf Reading package lists... Done Building dependency tree Reading state information... Done Some packages could not be installed....

Hi, just for information: On Suse 10.3 x86 > make check fails, if configure was called with --without-recommended-packages for the latest beta. The problem I stumbled upon is located in utlis. Here comes the relevant part of utils-Ex.Rout.fail in R-2.7.0/tests/Examples > ### ** Examples > > require(stats) > glmout <- capture.output(example(glm)) Fehler in .find.package(package, lib.loc, v...