search for: rdevel

...g out R SVN trunk the recommended way to keep up to date with R-devel and check packages with the latest version? My objective is to be able to have both R and R-devel versions installed/working and up to date. R-devel binaries would be available as symlinks in my home directory so that I can do: Rdevel CMD check mypkg Rdscript -e "some R code" anywhere on my system. So the workflow would be: Only once: svn co https://svn.r-project.org/R/trunk rdevel Then in rdevel: svn update ./configure --prefix=~/bin/R-devel make make install [Only after first compilation: cd ~/bin/; ln- s R...

Hi all, I'm getting an issue with Rdevel where make check-recommended hangs consistently for me on Mac El Capitan when checking the Matrix package. I did svn update and tools/rsync_recommended earlier today and it didn't fix the issue. Specifically, it is hanging on the * checking dependencies in R code ... stage (while checking M...

Hi, With a fresh Rdevel r66690 (yesterday 26th) in ~/R/Rtrunk I get : ~/R/Rtrunk $ ./configure CC="gcc -std=gnu99 -fsanitize=address" CFLAGS="-fno-omit-frame-pointer -O0 -g -Wall -pedantic -mtune=native" --without-recommended-packages ~/R/Rtrunk $ make clean ~/R/Rtrunk $ make Works fine. Now addin...

Hi Duncan, just noticed that after installing the Windows R-2.13.0 build there is no i386 directory in the R-2.13.0dev/bin directory and hence no Rgui.exe. Is this intentional with the devel version? I downloaded from http://cran.ms.unimelb.edu.au/, where it says: "This is a combined Windows 32/64 bit binary build of the 2010-11-27 r53672 development snapshot of R (which will eventually

Dear R-sig-debian, As of last night, we are running into a build failure when trying to compile the development version of R from the svn repository, Revision: 64090: ./configure && make -j4 distclean && ./configure && make -j4 [lots of normal compile output not shown...] building/updating vignettes for package 'utils' ... processing 'Sweave.Rnw' Error:

Dear R-Devel, Note: I posted a similar message to R-sig-debian yesterday because I assumed it was a Debian issue, received response that it it may be more appropriate for r-devel since it involves building from the svn version. As of Oct 21, we are running into a build failure when trying to compile the development version of R from the svn repository. The problem still persists as of

...t for the Windows binaries. This is what R --version and sessionInfo() report since a couple of days: R version 2.14.0 Patched (2006-00-00 r00000) R Under development (unstable) (2006-00-00 r00000) Also, "r00000" is listed as the revision on: http://cran.r-project.org/bin/windows/base/rdevel.html http://cran.r-project.org/bin/windows/base/rpatched.html /Henrik

I've been having problems building vignettes in bioconductor packages with R-devel. Turns out that Rdevel/share/texmf/hyperref.cfg wants Blue and Red predefined, when only blue and red are defined (as of rsync Rdevel, Sept 10th). This is on a Debian unstable system (Sept 9th version). Might not apply to all other tetex systems. Seems to have bitten the bioconductor build system, though. Symptom:...

...58867/r-v3-4-0-2-unable-to-find-libgfortran-so-3-on-arch) it seems that gfortran 7 has bumped the .so object to version 4. It seems that a relatively straightforward workaround for the present would be to install a legacy version of gcc alongside the current version. I'm wondering if Rcore or Rdevel are moving towards being able to handle the new compiler version any time soon, and if there are any other workarounds than having two versions of the compiler. Thanks. Chris [[alternative HTML version deleted]]

...months ago.) > > Just follow the instructions in the R-admin manual to install from sources. > > OTOH, ' v3.4.0-2 ' is not an R version number, so I think you are > referring to binary distributions on your Linux distro, which are not > the responsibility of 'Rcore or Rdevel' (whatever they are). > > On 23/06/2017 14:40, Chris Cole wrote: > > I'm on Arch Linux kernel version 4.11.6-1 using gcc version 7.1.1: > > > > gcc --version > > gcc (GCC) 7.1.1 20170516 > > > > I have installed R through the arch package manager pa...

Dear Prof. Ripley, Thank you for your answer. I think I am way over my head here. (Using Doker adds a level of complexity that I'm afraid I can't manage for now so I am happy with building Rdevel and using it in to run these tests). After building Rdevel with what I think are the correct options** (just to avoid mistakes I have also fully removed R from my system just before and insured that the following packages are all updated) apt-get install bash-completion bison debhelper defaul...

...elopment, R complains about a dependency having been built before R 3.0.0. I obviously don't have my environment variables set correctly, but I don't see why or how R is finding my daily-use package library; if anything I would have expected it to fail with a missing dependency. If I start Rdevel with --vanilla (to mimic Rdevel CMD build) I see: > .libPaths() [1] "/home/gavin/R/devlibs" "/home/gavin/R/devel/build/library" the first entry there is because I have temporarily set R_LIBS to that directory via export R_LIBS=/home/gavin/R/devlibs. From there w...

Hello, I am receiving this message when uploading my R package to rdevel. https://win-builder.r-project.org/incoming_pretest/180305_110240_Compositional_29/00check.log Can anybody please help? [[alternative HTML version deleted]]

Until recently R 2.1.0 was called rw2010dev. I just visited http://cran.r-project.org/bin/windows/base/rdevel.html and noticed its now called rw2010alpha, not rw2010dev. I would like to use it without downloading all the libraries over again. Can I - just rename my rw2010dev folder (Windows XP) to rw2010alpha and then install rw2010alpha to that? or - install it in a separate rw2010alpha folder...

...at essentially provides a wrapper for a group of functions in another Suggested package (it sets appropriate defaults for the context, transforms output, etc). I've implemented this by verifying that the package was loaded with require(sna) and then do.call(snaFunName, args = args) The rDevel check is requesting that I use requireNamespace(sna) instead of directly loading the SNA package. This seems reasonable, except that I have yet to figure out a way to use do.call to call the function when the namespace is attached but package is not loaded. do.call("sna::funName",..)...

...uctions in the R-admin manual to install from >> sources. >> > >> > OTOH, ' v3.4.0-2 ' is not an R version number, so I think you are >> > referring to binary distributions on your Linux distro, which are not >> > the responsibility of 'Rcore or Rdevel' (whatever they are). >> > >> > On 23/06/2017 14:40, Chris Cole wrote: >> > > I'm on Arch Linux kernel version 4.11.6-1 using gcc version 7.1.1: >> > > >> > > gcc --version >> > > gcc (GCC) 7.1.1 20170516 >> > > &...

Dear All, I'm trying to implement the section of the manual pertaining to the gcc-ubsan test carried by CRAN on my local computer (ubuntu 14.04): http://www.stats.ox.ac.uk/pub/bdr/memtests/gcc-UBSAN/README.txt I was wondering whether someone could tell what the minimal version of the gcc tool chain needed to run the gcc-ASAN and gcc-UBSAN alignment tests on ones local

...ribing > b = by(1:2, 1:2, identity) > class(as.list(b)) [1] "list" > sessionInfo() R Under development (unstable) (2017-12-19 r73926) Platform: x86_64-apple-darwin15.6.0 (64-bit) Running under: OS X El Capitan 10.11.6 Matrix products: default BLAS: /Users/beckerg4/local/Rdevel/R.framework/Versions/3.5/Resources/lib/libRblas.dylib LAPACK: /Users/beckerg4/local/Rdevel/R.framework/Versions/3.5/Resources/lib/libRlapack.dylib locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 attached base packages: [1] stats graphics grDevices utils dat...

...ach one separately with R CMD Rd2pdf yourfilenamehere.Rd and see what happens. There is a list especially for package developers which might be better in future. Michael On 05/03/2018 10:51, michael tsagris via R-help wrote: > Hello, I am receiving this message when uploading my R package to rdevel. > https://win-builder.r-project.org/incoming_pretest/180305_110240_Compositional_29/00check.log > Can anybody please help? > > ??? [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE...

I'm trying to track down a rather critical problem. This happens both on Debian's current unstable as well a from anoncvs built this morning, reinstalling MASS. Is anyone else seeing this or am I just broken and special? 609$ /home/Rdevel/bin/R R : Copyright 2004, The R Foundation for Statistical Computing Version 1.9.0 Under development (unstable) (2004-03-04), ISBN 3-900051-00-3 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or '...