search for: rbv

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2007 Feb 15
1
Problem in summaryBy
...in summaryBy. I get the correct values when I use FUN=min directly. Any help is much appreciated. The continuous information provided in this forum is fabulous as are the different R packages available. Rene # Simulated simplified data Subj <- rep(1:4, each=6) Analyte <- rep(c(rep("RBV",3),rep("TBV",3)),4) Dose <- rep(c(200,400,600),8) AUC <- rnorm(24, c(40,80,120,4,8,12), c(8,16,24,0.8,0.16,0.24)) # The real dataset may have NAs in it df <- data.frame(Subj, Analyte, Dose, AUC) myStats <- function(x) { count <- function(x) length(na.omit(x))...
2010 Jul 27
1
R CMD build wiped my computer
...FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c rIW.cc -o rIW.o g++ -m64 -I/usr/include/R -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c rbv.cc -o rbv.o gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c rtnorm.c -o rtnorm.o g++ -m64 -I/usr/include/R -I/usr/local/include -fpic -O2 -g -pi...
2010 Jul 27
1
R CMD build wiped my computer
...FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c rIW.cc -o rIW.o g++ -m64 -I/usr/include/R -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c rbv.cc -o rbv.o gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c rtnorm.c -o rtnorm.o g++ -m64 -I/usr/include/R -I/usr/local/include -fpic -O2 -g -pi...
2010 Jul 27
1
R CMD build wiped my computer
...Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c rIW.cc -o rIW.o g++ -m64 -I/usr/include/R -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c rbv.cc -o rbv.o gcc -m64 -std=gnu99 -I/usr/include/R -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c rtnorm.c -o rtnorm.o g++ -m64 -I/usr/include/R -I/usr/local/include -fpic -O2 -g -pipe -Wal...
2016 Aug 19
2
can't build from source: error: template with C linkage
Hi All, Users have contacted me because they can not build MCMCglmm from source. All are using R 3.3.0 on various machines with different compilers gcc (Ubuntu 5.4.0-6ubuntu1~16.04.2) 5.4.0 g++ (Ubuntu 4.8.4-2ubuntu1~14.04.3) 4.8.4 Mac OS X El Capitan (version/compiler unspecified) The issue seems to be with mixing C/C++ with the repeated error: /usr/include/c++/5/bits/cpp_type_traits.h:118:3:
2016 Aug 19
1
can't build from source: error: template with C linkage
...le -c rtcmvnorm.c -o rtcmvnorm.o > g++ -I/usr/share/R/include -DNDEBUG??????-fpic??-g -O2 -fstack- > protector-strong -Wformat -Werror=format-security -Wdate-time > -D_FORTIFY_SOURCE=2 -g??-O3 -Wall -pipe -Wno-unused??-O3 -pipe -Wno- > maybe-uninitialized -Wno-unused-but-set-variable -c rbv.cc -o rbv.o > gcc -I/usr/share/R/include -DNDEBUG??????-fpic??-g -O2 -fstack- > protector-strong -Wformat -Werror=format-security -Wdate-time > -D_FORTIFY_SOURCE=2 -g??-O3 -Wall -pipe -pedantic -std=gnu99??-O3 > -pipe -std=gnu99 -Wno-maybe-uninitialized -Wno-unused-but-set- > variabl...
2016 Aug 19
0
can't build from source: error: template with C linkage
...-unused-but-set-variable -c rtcmvnorm.c -o rtcmvnorm.o g++ -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -pipe -Wno-unused -O3 -pipe -Wno-maybe-uninitialized -Wno-unused-but-set-variable -c rbv.cc -o rbv.o gcc -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -pipe -pedantic -std=gnu99 -O3 -pipe -std=gnu99 -Wno-maybe-uninitialized -Wno-unused-but-set-variable -c rtnorm.c -o rtnorm.o g...
2008 Jun 30
4
Rebuild of kernel 2.6.9-67.0.20.EL failure
Hello list. I'm trying to rebuild the 2.6.9.67.0.20.EL kernel, but it fails even without modifications. How did I try it? Created a (non-root) build environment (not a mock ) Installed the kernel.scr.rpm and did a rpmbuild -ba --target=`uname -m` kernel-2.6.spec 2> prep-err.log | tee prep-out.log The build failed at the end: Processing files: kernel-xenU-devel-2.6.9-67.0.20.EL Checking