search for: rbuild

Displaying 20 results from an estimated 88 matches for "rbuild".

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2006 Mar 09
1
R2.2.1-patched build failed with PGI 6.1 on x86-64
Hi All, While attempting to build R-patched using the Portland Group compiler suite on our dual Opteron 250 box running Scyld 29cz5 (based on RH, kernel 2.4.29), I get: make[5]: Leaving directory `/home/andy/Rbuild/R221-pgi/src/library/tools/src' make[5]: Entering directory `/home/andy/Rbuild/R221-pgi/src/library/tools/src' pgcc -I../../../../include -I/include -I/include/CC -fpic -O2 -Kieee -c /home/andy/Rbuild/R-patched/src/library/tools/src/text.c -o text.o pgcc -I../../../../include -I/includ...
2002 May 01
2
R-1.5.0: compiling package foreign on WinNT failed
Dear R-help, I was able to build R-1.5.0 on WinNT w/o problem (actually it seems easier than previous version). However, I encountered problem when trying to compile the recommended package foreign: make: Entering directory `/cygdrive/g/rbuild/R-1.5.0/src/gnuwin32' make DLLNM= FLIBS="-lg2c -lRblas" BUILD=MINGW \ -C G:/Rbuild/R-1.5.0-recommended/R.INSTALL/foreign PKG=foreign RHOME=g:/rbuild /R-1.5.0 RLIB=g:/rbuild/R-1.5.0/library \ -f g:/rbuild/R-1.5.0/src/gnuwin32/MakePkg make[1]: Entering directory `/cygdrive/g/Rbuild...
2014 Sep 05
0
'mv: preserving permissions for `all.R': Operation not supported' when installing R 3.1.0 via compiling source code in CentOS
...). After configure it ($/home/XX/download/R3.1.0/configure --prefix=/home/zj/local/R --enable-R-shlib --with-x?) successfully, I make it ($make). But there always is an error when make the base package. As bellow: mkdir -p -- ../../../library/translations make[4]: Entering directory `/home/zj/tmp/rbuild/src/library/translations' make[4]: Leaving directory `/home/zj?/tmp/rbuild/src/library/translations' make[3]: Leaving directory `/home/zj?/tmp/rbuild/src/library/translations' make[3]: Entering directory `/home/zj?/tmp/rbuild/src/library/base' building package 'base' make[4]...
2006 Jun 12
2
about integration of a library into package creation
...all a library in the namespace file such as : useDynLib(quadprog) after checking my directory with the command "rcmd check" (i am on WindowsXP) i get an error: package / namespace load failed the path of the library is: D:\R\library\quadprog the path of the building files is: D:\RBuild\svcR and the comand i use to compile is: rcmd check D://RBuild//svcR i dont understand, it is a path problem about the dll related to the library ? thank for help Nicolas * checking package subdirectories ... WARNING Subdirectory 'src' contains no source files. * checking R files for...
2002 May 16
3
building packages on windows
...have it is a directory that is specified in a path statement) H:\R\bin>rcmd build --binary --use-zip h:\taxon2 * checking for file 'h:\taxon2/DESCRIPTION' ... OK make: Entering directory `/cygdrive/h/R/src/gnuwin32' make DLLNM= \ -C h://taxon2 PKG=taxon2 RHOME=h:/R RLIB=c:/TEMP/Rbuild.373 \ -f h:/R/src/gnuwin32/MakePkg make[1]: Entering directory `/cygdrive/h/taxon2' make[1]: /bin/sh.exe: Command not found make[1]: *** [c:/TEMP/Rbuild.373/taxon2/zzzz] Error 127 make[1]: Leaving directory `/cygdrive/h/taxon2' make: *** [pkg-taxon2] Error 2 make: Leaving directory `/cygd...
2005 Apr 07
3
R-beta 2004-04-07 build failed on AIX
...NLS Options enabled: R profiling Recommended packages: yes 4. Ran `gmake', which produced the following: [...] xlc_r -Wl,-G -Wl,-bM:SRE -Wl,-H512 -Wl,-T512 -Wl,-bnoentry -Wl,-bexpall -Wl,-bM:SRE -Wl,-H512 -Wl,-T512 -Wl,-bnoentry -Wl,-bexpall -Wl,-bI:/SFS/user/ry/liawand/R/Rbuild/etc/R.exp -L/usr/local/lib -o survival.so agexact.o agfit2.o agfit3.o agfit5.o agfit_null.o agmart.o agmart2.o agscore.o agsurv1.o agsurv2.o agsurv3.o char_date.o chinv2.o chinv3.o cholesky2.o cholesky3.o chsolve2.o chsolve3.o cox_Rcallback.o coxdetail.o coxfit2.o coxfit5.o coxmart.o coxph_wtest.o...
2004 Jan 20
1
problem with rcmd build R-devel
Hi All, I am having a problem with Rcmd build using R-devel on WinXP. If I try to build a package using the --binary flag, I get the following error: Error: cannot change to directory ' 'c:/TEMP/Rbuild.XXXX' ' Where XXXX is some number. I can get Rcmd build to work using R-1.7.1 and R-1.8.0, so I don't think it is a permission problem. I looked at the build file, and the relevant portion appears to be the same in all versions: if($opt_binary) { my $libdir = "${R::Vars::TMPDI...
2004 Jan 20
1
problem with rcmd build R-devel
Hi All, I am having a problem with Rcmd build using R-devel on WinXP. If I try to build a package using the --binary flag, I get the following error: Error: cannot change to directory ' 'c:/TEMP/Rbuild.XXXX' ' Where XXXX is some number. I can get Rcmd build to work using R-1.7.1 and R-1.8.0, so I don't think it is a permission problem. I looked at the build file, and the relevant portion appears to be the same in all versions: if($opt_binary) { my $libdir = "${R::Vars::TMPDI...
2014 Aug 08
4
[LLVMdev] Efficient Pattern matching in Instruction Combine
...plemented for this already *C code :* suyog at suyog-Inspiron-N5010:~$ cat 1.c #include<stdio.h> int cal(int a, int b) { *return ((~a & b) | a);* } int main(){ int a, b; scanf("%d %d", &a, &b); return cal(a,b); } LLVM IR at O0 : suyog at suyog-Inspiron-N5010:~$ Open/rbuild/bin/clang -S -O0 -emit-llvm 1.c ; Function Attrs: nounwind *define i32 @cal(i32 %a, i32 %b) #0 { %1 = xor i32 %a, -1 %2 = and i32 %1, %b %3 = or i32 %2, %a ret i32 %3* } ; Function Attrs: nounwind define i32 @main() #0 { .. .. %4 = call i32 @cal(i32 %2, i32 %3) ret i32 %4 } *LLVM...
2011 Mar 07
1
Problem building R-2.13 r54683 on Windows
...l. I get the same error as below: gcc -std=gnu99 -I../../include -DHAVE_CONFIG_H -O3 -Wall -pedantic -c zutil.c -o zutil. o make[4]: *** No rule to make target `Rzlib.def', needed by `Rzlib.dll'. Stop. make[3]: *** [rlibs] Error 1 make[2]: *** [../../bin/i386/R.dll] Error 2 make[1]: *** [rbuild] Error 2 make: *** [all] Error 2 Hope someone can have a look. Thanks Dan On Thu, Mar 3, 2011 at 10:50 AM, Dan Tenenbaum <dtenenba at fhcrc.org> wrote: > I am building R-2.13 r54645 from source as described here: > http://cran.r-project.org/doc/manuals/R-admin.html#Building-from-sour...
2004 Dec 22
2
Creating packages in windoze: *** [indices] Error 1
...t; manual but have been unable to determine how to solve my problem. Thank you in advance for any and all help. Niels Waller Vanderbilt University H:\R\rw2001\src\gnuwin32>rcmd build --binary --use-zip taxon * checking for file 'taxon/DESCRIPTION' ... OK installing R.css in h:/TEMP/Rbuild.1020 ---------- Making package taxon ------------ adding build stamp to DESCRIPTION installing R files installing inst files installing data files installing man source files installing indices Error in parse(file, n, text, prompt) : syntax error on line 1 Execution halted make[2]: **...
2002 Jun 28
1
windres problem
...ke the following. C:\Temp>Rcmd build --binary VGAM * checking for file 'VGAM/DESCRIPTION' ... OK make: Entering directory `/cygdrive/c/PROGRA~1/R/rw1051/src/gnuwin32' make DLLNM= FLIBS="-lg2c -lRblas" \ -C C:/Temp/VGAM PKG=VGAM RHOME=c:/PROGRA~1/R/rw1051 RLIB=c:/TEMP/Rbuild.972 \ -f c:/PROGRA~1/R/rw1051/src/gnuwin32/MakePkg make[1]: Entering directory `/cygdrive/c/Temp/VGAM' ---------- Making package VGAM ------------ mkdir -p c:/TEMP/Rbuild.972/VGAM cp -r ./INDEX ./TITLE ./Installation c:/TEMP/Rbuild.972/VGAM/ adding build stamp to DESCRIPTION making DLL...
2014 Aug 13
2
[LLVMdev] Efficient Pattern matching in Instruction Combine
...;>> >>>> int main(){ >>>> int a, b; >>>> scanf("%d %d", &a, &b); >>>> return cal(a,b); >>>> } >>>> >>>> LLVM IR at O0 : >>>> >>>> suyog at suyog-Inspiron-N5010:~$ Open/rbuild/bin/clang -S -O0 -emit-llvm >>>> 1.c >>>> >>>> ; Function Attrs: nounwind >>>> >>>> >>>> >>>> >>>> *define i32 @cal(i32 %a, i32 %b) #0 { %1 = xor i32 %a, -1 %2 = and >>>> i32 %1, %b %3 = o...
2004 Oct 31
1
Problem in building a package in R 2.0.0
...--------------------------------------------------------------------------------- C:\PROGRA~1\R\rw2000\bin>Rcmd build --binary --use-zip C:\PROGRA~1\R\rw2000\src\library\gamlss * checking for file 'C:\PROGRA~1\R\rw2000\src\library\gamlss/DESCRIPTION' ... OK installing R.css in c:/TEMP/Rbuild.1520 ---------- Making package gamlss ------------ adding build stamp to DESCRIPTION installing R files installing inst files installing data files preparing package gamlss for lazy data loading installing man source files installing indices zipping data installing help >&gt...
2002 Jan 24
1
Compiling R Package on Windows
...with R 1.4.0 released in December. This only happens if I put the --binary option in. For example: Rcmd build --binary cw returns the error: make: Entering directory `/cygdrive/c/PROGRA~1/R/RW1040/src/gnuwin32' make DLLNM= \ -C C:/MyRWork/cw PKG=cw RHOME=c:/PROGRA~1/R/RW1040 RLIB=c:/TEMP/Rbuild.503609 \ -f c:/PROGRA~1/R/RW1040/src/gnuwin32/MakePkg make[1]: Entering directory `/cygdrive/c/MyRWork/cw' if [ ! -f ./TITLE -a -f ./DESCRIPTION ] ; then \ perl c:/PROGRA~1/R/RW1040/share/perl/maketitle.pl ./DESCRIPTION > TITLE; \ fi make[1]: /bin/sh.exe: Command not found make[1]: *** [...
2007 Oct 02
0
patch: allow R CMD build exclude patterns to match symlinks
...on"} . ".tar"; + my $filepath = &file_path($startdir, $filename); + R_system(join(" ", + ("$tar chf", + &shell_quote_file_path($filepath), + "$pkgname"))); + my $tmpdir = R_tempfile("Rbuild"); + rmtree($tmpdir) if(-d $tmpdir); + mkdir("$tmpdir", 0755) + or die "Error: cannot create directory '$tmpdir'\n"; + chdir($tmpdir); + ## was xhf, but there are no symbolic links here and that is invalid + ## on FreeBSD, see http://www.freebsd...
2016 Apr 03
2
File 1 is not in sorted order Error
...ror when i run the "make all recommended" command: C:/Rtools/mingw_64/bin/windres -F pe-x86-64 -i dllversion.rc -o dllversion.o comm: file 1 is not in sorted order make[4]: *** [Rgraphapp.def] Error 1 make[3]: *** [rlibs] Error 1 make[2]: *** [../../bin/x64/R.dll] Error 2 make[1]: *** [rbuild] Error 2 make: *** [all] Error 2 Can someone please help me figure out this error. I've tried researching on my own but i'm out of options. Thanks in advance. Michael Morrison [[alternative HTML version deleted]]
2005 Jan 28
2
compiling and making R-2.0.1 for windows XP
...ocfiles'. -------- Building ../../../library/base/R/Rprofile from ../../library/profile/Common.R ../../library/profile/Rprofile.windows-------- mkdir -p ../../../library/base/R cat: not found make[3]: *** [../../../library/base/R/Rprofile] Error 127 make[2]: *** [fixfiles] Error 2 make[1]: *** [rbuild] Error 2 make: *** [all] Error 2 Can anybody suggest a solution? Thanks, John
2015 Jan 08
1
New version of Rtools for Windows
...collect2.exe: error: ld returned 5 exit status >Makefile:150: recipe for target 'R.dll' failed >make[3]: *** [R.dll] Error 1 >Makefile:179: recipe for target '../../bin/x64/R.dll' failed >make[2]: *** [../../bin/x64/R.dll] Error 2 >Makefile:104: recipe for target 'rbuild' failed >make[1]: *** [rbuild] Error 2 >Makefile:14: recipe for target 'all' failed >make: *** [all] Error 2 > >I still had to delete those lines in compat.c, so this build, were it >to have completed, is still subject to the non-conformance of >scientfic notation p...
2004 Nov 29
2
Building latest version of package
...? So I tried rebuilding it using my new version of R: R CMD BUILD --binary mypackage hhc: not found cp: cannot stat `mypackage.chm': No such file or directory make[1]: *** [chm-mypackage] Error 1 make: *** [pkg-mypackage] Error 2 *** Installation of mypackage failed *** Removing 'f:/tmp/Rbuild.2972/mypackage' ERROR * installation failed I didn't have these problems before. What is "hhc" and why can't R find it? In general, will I have to re-build my package everytime a new version of R is released? Many thanks Mick