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After some reorganization, we would like to announce the availability on CRAN of a new version (1.6) of our package "distr" as well as the availabilty on CRAN of the new packages "distrEx", "distrSim", "distrTEst", "RandVar". ----------------------------------------------------------------------------------------- Changes from 1.5 to 1.6 -[former package "distr"] reorganization: we have split up our package distr into smaller units: * "distr" now only contains the (basic) classes and method...

After some reorganization, we would like to announce the availability on CRAN of a new version (1.6) of our package "distr" as well as the availabilty on CRAN of the new packages "distrEx", "distrSim", "distrTEst", "RandVar". ----------------------------------------------------------------------------------------- Changes from 1.5 to 1.6 -[former package "distr"] reorganization: we have split up our package distr into smaller units: * "distr" now only contains the (basic) classes and method...

R-devel, I'm interested in looking at some examples of existing R packages that rely heavily on S4 classes to get a feel for varying styles and package organization techniques. Could you recommend any packages that might serve as a good starting point? Thanks in advance, Jeff

R-devel, I'm interested in looking at some examples of existing R packages that rely heavily on S4 classes to get a feel for varying styles and package organization techniques. Could you recommend any packages that might serve as a good starting point? Thanks in advance, Jeff

...stimators ----------------------------------------------------------------------------------------- We would like to announce the availability on CRAN (with possibly a minor delay until on every mirror) of new versions of our packages for the computation of optimally robust estimators; i.e., "RandVar", "ROptEst", "RobLox" as well as a new package "RobAStBase" (not yet: ROptRegTS and RobRex). ----------------------------------------------------------------------------------------- Devel versions on R-forge ------------------------------------------------------...

...stimators ----------------------------------------------------------------------------------------- We would like to announce the availability on CRAN (with possibly a minor delay until on every mirror) of new versions of our packages for the computation of optimally robust estimators; i.e., "RandVar", "ROptEst", "RobLox" as well as a new package "RobAStBase" (not yet: ROptRegTS and RobRex). ----------------------------------------------------------------------------------------- Devel versions on R-forge ------------------------------------------------------...

I haven't seen this cryptic warning before: > update.views('Robust') Warning message: In update.views("Robust") : The following packages are not available: covRobust, distr, FRB, MASS, mblm, multinomRob, mvoutlier, quantreg, RandVar, rgam, RobAStBase, robfilter, RobLox, RobRex, robust, RobustAFT, robustbase, ROptEst, ROptRegTS, rrcov, sandwich, wle > library(covRobust) > It is puzzling because — as the second command shows — the package covRobust is installed. Here is my > sessionInfo() R version 2.14.2 (2012-02-29...

...from package startupmsg i.e. NEWS("RobAStBase")). First of all the new package RobLoxBioC was added to the family which includes S4 classes and methods for preprocessing omics data, in particular gene expression data. ############################################## ## All packages (RandVar, RobAStBase, RobLox, RobLoxBioC, ## ROptEst, ROptEstOld, ROptRegTS, RobRex) ############################################## - TOBEDONE file was added as a starting point for collaborations. The file can be displayed via function TOBEDONE from package startupmsg; e.g. TOBEDONE...

...from package startupmsg i.e. NEWS("RobAStBase")). First of all the new package RobLoxBioC was added to the family which includes S4 classes and methods for preprocessing omics data, in particular gene expression data. ############################################## ## All packages (RandVar, RobAStBase, RobLox, RobLoxBioC, ## ROptEst, ROptEstOld, ROptRegTS, RobRex) ############################################## - TOBEDONE file was added as a starting point for collaborations. The file can be displayed via function TOBEDONE from package startupmsg; e.g. TOBEDONE...

...on't think it's in any site files. In this session's R.home(), I have $ cat .Rprofile options(stringsAsFactors = FALSE) so it's not in there. > search() [1] ".GlobalEnv" "package:grDevices" "package:datasets" "package:RandVar" [5] "package:distrEx" "package:actuar" "package:evd" "package:distr" [9] "package:SweaveListingUtils" "package:sfsmisc" "package:utils" "package:stats&qu...

...bug reports or simple feedback, Best, Peter, Matthias, Nataliya ------------------------------------------------------------------------ ------------------------------------------------------------------------ New versions 0.8 of our RobASt-family of packages are now available on CRAN. (i.e.; RandVar, RobAStBase, ROptEst, RobLox, ROptEstOld, ROptEstTS, RobRex, RobLoxBioC) Most importantly, we have included: + a quasi-MC trick by Nataliya Horbenko to better produce random variables under complicated not necessarily monotone transformations + enhanced functions infoPlot, (...

...bug reports or simple feedback, Best, Peter, Matthias, Nataliya ------------------------------------------------------------------------ ------------------------------------------------------------------------ New versions 0.8 of our RobASt-family of packages are now available on CRAN. (i.e.; RandVar, RobAStBase, ROptEst, RobLox, ROptEstOld, ROptEstTS, RobRex, RobLoxBioC) Most importantly, we have included: + a quasi-MC trick by Nataliya Horbenko to better produce random variables under complicated not necessarily monotone transformations + enhanced functions infoPlot, (...

Is there some reason why > (1:2)+(1:3) [1] 2 4 4 Warning message: In (1:2) + (1:3) : longer object length is not a multiple of shorter object length can't be made into an error? I realise it was there in S-PLUS, but since it produces a warning there can't be many examples on CRAN or Bioconductor using it, and I can't think of any situation where it would be used deliberately.

I'm in the process of converting some S3 methods to S4 methods. I have this function : setGeneric("enrichmentCalc", function(rs, organism, seqLen, ...){standardGeneric("enrichmentCalc")}) setMethod("enrichmentCalc", c("GenomeDataList", "BSgenome"), function(rs, organism, seqLen, ...) { ... ... ... })

...t;,"quantregForest","qvalue","qvcalc","R.matlab","R.oo","R.utils","R2HTML","R2WinBUGS","race","RadioSonde","rake","randaes","RandomFields","randomForest","RandVar","rankreg","RArcInfo","RBloomberg","rbugs","Rcmdr","Rcmdr.HH","RColorBrewer","rcom","RcppTemplate","rda","ref","regress","relaimpo","relax","reldist&...