search for: prosit

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2015 Jan 26
2
Inspect a "delayed" assigned whose value throws an error?
...odd. Unfortunately, this doesn't seem to help for reaching into the namespace of hgu133a.db and inspecting 'hgu133aPFAM', e.g. > library("hgu133a.db") > substitute(hgu133aPFAM, env=ns) Error: hgu133aPFAM is defunct. Please use select() if you need access to PFAM or PROSITE accessions. > evalq(substitute(hgu133aPFAM), envir=ns) Error: hgu133aPFAM is defunct. Please use select() if you need access to PFAM or PROSITE accessions. > evalq(substitute(hgu133aPFAM, env=ns), envir=ns) Error: hgu133aPFAM is defunct. Please use select() if you need access to PFAM o...
2015 Jan 26
2
Inspect a "delayed" assigned whose value throws an error?
...reported on a problem that boiled down to the following: # source("http://bioconductor.org/biocLite.R"); biocLite("hgu133a.db") > library("hgu133a.db") > is.function(hgu133aPFAM) Error: hgu133aPFAM is defunct. Please use select() if you need access to PFAM or PROSITE accessions. > .Internal(inspect(hgu133aPFAM)) > traceback() 3: stop(paste(msg, collapse = ""), call. = FALSE, domain = NA) 2: .Defunct(msg = msg) 1: (function () { if (grepl("PFAM", x)) { bimapName <- paste0(prefix, "PFAM") }...
2015 Jan 26
0
Inspect a "delayed" assigned whose value throws an error?
...ed down to the > following: > > # source("http://bioconductor.org/biocLite.R"); biocLite("hgu133a.db") >> library("hgu133a.db") >> is.function(hgu133aPFAM) > Error: hgu133aPFAM is defunct. Please use select() if you need access to PFAM > or PROSITE accessions. >> .Internal(inspect(hgu133aPFAM)) > >> traceback() > 3: stop(paste(msg, collapse = ""), call. = FALSE, domain = NA) > 2: .Defunct(msg = msg) > 1: (function () > { > if (grepl("PFAM", x)) { > bimapName <- past...
2015 Jan 27
0
Inspect a "delayed" assigned whose value throws an error?
...em to help for reaching into the > namespace of hgu133a.db and inspecting 'hgu133aPFAM', e.g. >> library("hgu133a.db") >> substitute(hgu133aPFAM, env=ns) > Error: hgu133aPFAM is defunct. Please use select() if you need access to PFAM > or PROSITE accessions. >> evalq(substitute(hgu133aPFAM), envir=ns) > Error: hgu133aPFAM is defunct. Please use select() if you need access to PFAM > or PROSITE accessions. >> evalq(substitute(hgu133aPFAM, env=ns), envir=ns) > Error: hgu133aPFAM is defunct. Please us...
2005 Nov 22
1
spnego_gen_negTokenTarg failed: No credentials cache found
...5_get_credentials failed for cifs/aqmlin03.alfa-moving@ALFA-MOVING.SE (Ticket expired) spnego_gen_negTokenTarg failed: Ticket expired session setup failed: SUCCESS - 0 (From localhost I can't use roca1 as user so this was run as root.) Here are the same smbclient attempts from an OSX client: PROSIT:~ roca1$ smbclient //aqmlin03/gemensam -U roca1 Password: Domain=[ALFA-MOVING] OS=[Unix] Server=[Samba 3.0.20b-3.1-SUSE] tree connect failed: NT_STATUS_ACCESS_DENIED PROSIT:~ roca1$ smbclient -k //aqmlin03/gemensam spnego_gen_negTokenTarg failed: No credentials cache found session setup failed: N...