Displaying 2 results from an estimated 2 matches for "processeddir".
2011 Oct 07
1
Creating One Single Object with Phenotype and Expression Data
...ction, and I have all the phenotype data available as csv files. Here is
what I have in regards to the expression data:
library(affy)
library(arrayQualityMetrics)
inputargs <- commandArgs(TRUE)
print(inputargs)
sessionInfo()
strInputAccession <- inputargs[1]
strBaseDir <- inputargs[2]
processedDir <-
paste(strBaseDir,strInputAccession,"PROCESSED/DEFAULT",sep="/")
qcDir <- paste(strBaseDir,strInputAccession,"QC",sep="/")
sampleFile <-
paste(processedDir,"/",strInputAccession,"_RAWfilenames.txt",sep="")
defaultExprs...
2011 Oct 07
0
Creating One Single Object Linking Multiple Datapoints
...he expression data:
>>
>> library(affy)
>> library(arrayQualityMetrics)
>>
>> inputargs<- commandArgs(TRUE)
>> print(inputargs)
>> sessionInfo()
>>
>> strInputAccession<- inputargs[1]
>> strBaseDir<- inputargs[2]
>>
>> processedDir<-
>> paste(strBaseDir,**strInputAccession,"PROCESSED/**DEFAULT",sep="/")
>> qcDir<- paste(strBaseDir,**strInputAccession,"QC",sep="/"**)
>> sampleFile<-
>> paste(processedDir,"/",**strInputAccession,"_**RAWfilen...