Displaying 1 result from an estimated 1 matches for "probeinfo_expression".
2011 Jul 30
1
read.table only reads part of file
Hi all,
I encountered a problem when trying to read in an Illumina chip
annotation file. The offending file is large, so I zipped it up and
posted it at
http://www.genetics.ucla.edu/labs/horvath/CoexpressionNetwork/tmp/ProbeInfo_Expression.txt.bz2
Executing this:
annot = read.table(bzfile("ProbeInfo_Expression.txt.bz2"),
comment.char="", sep = "\t", fill = TRUE, header = TRUE);
leads to
> dim(annot)
[1] 25952 28
i.e. 25952 rows were read, but the file is some 48000 rows long....