search for: pphsm

...zard,hazard.ratio.plot,histdensity,"%ia%",ie.setup,interactions.containing,legend.nomabbrev,lm.pfit,lrm,lrtest,lsp,matinv,matrx,Newlabels,Newlevels,nomogram,num.intercepts,ols,ols.influence,oos.loglik,pantext,Penalty.matrix,Penalty.setup,pentrace,perimeter,perlcode,plot.xmean.ordinaly,pol,pphsm,predab.resample,Predict,psm,rcs,related.predictors,reVector,robcov,Rq,sascode,scored,sensuc,setPb,show.influence,specs,strat,Surv,"[.Surv",survdiffplot,survest,Survival,survplot,univarLR,validate,val.prob,val.probg,val.surv,vif,which.influence) importFrom(Hmisc) S3method(anova, rms) S3me...

Dear R Help group I need to run a command line script from within R session. I am not clear how i can acheive this. I tried shell and system function, but i am missing something critical.can someone provide help? My intention is to create a pdf file of a plot in R and then attach existing files from my system as attachment into the newly created pdf file. Any help would be greatly appreciated..

...all, I am trying to find a suitable R-function for parametric proportional hazard regressions. The package survival contains the coxph() function which performs a Cox regression which leaves the base hazard unspecified, i.e. it is a semi-parametric method. The package Design contains the function pphsm() which is good for parametric proportional hazard regressions when the underlying base distribution is "weibull" or "exponential". But what if I need a parametric proportional hazard model with the other "usual" distributions like '"gaussian"', '...

Hi to all, I am working on design package using survival function. First using PSM and adopting a weibull specification for the baseline hazard , I have got the following results(since weibull has both PH and AFT propreties ,in addition I have used the PPHSm command): Value Std. Error z p (Intercept) 1.768 1.0007 1.77 7.73e-02 SIZE -0.707 0.0895 -7.90 2.80e-15 REtoTA -0.896 0.4208 -2.13 3.33e-02 D1toEQ 0.281 0.0330 8.51 1.81e-17 EBTtoTA -6.706 1.0807 -6.21 5.46e-10 SALtoTA -3.94...

...e (x) ??? I cannot control the axes with labeling and any other covariate gets the same plot. I have tried using covariates in the Design and Survival packages, but they always return the same error msgs. I realise that the former 2 are AFT survival models, but even when I convert the object with pphsm() in the Design package, I get the same errors. Please can anyone enlighten me as to what I seem to be doing / understanding wrongly? Regards, Eric Lim Papworth Hospital Cambridge, UK futime status [1,] 0.40000000 1 [2,] 0.80000000 1 [3,] 7.10000000 1 [4,]...

...Rd files to change Design to rms * Restricted NAMESPACE to functions expected to be called by users * Improved Fortran code to use better dimensions for array declarations * Added the basic bootstrap for confidence limits for bootBCa, contrast, Predict, summary * Fixed bug in latex.pphsm, neatened pphsm code * Neatened code in rms.s * Improved code for bootstrapping ranks of variables in anova.rms help file * Fixed bug in Function.rms - undefined Nam[[i]] if strat. Thanks: douglaswilkins@yahoo.com * Made quantreg be loaded at end of search list in Rq so it doesn&...

...missing link(s): validate.Design latex.ols pentrace text html latex example missing link(s): nlminb plot.Design text html latex example missing link(s): key matxv survest key mgp.axis.labels win.slide gs.slide pphsm text html latex example missing link(s): print.pphsm print.cph text html latex missing link(s): print.cphfit print.coxreg print.cph.fit text html latex missing link(s): print.coxreg p...

Hello I would like to compare the results obtained with a classical non parametric proportionnal hazard model with a parametric proportionnal hazard model using a Weibull. How can we obtain the equivalence of the parameters using coxph(non parametric model) and survreg(parametric model) ? Thanks Virginie