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...es $ make generates the following results: $ make creating src/scripts/R.fe config.status: creating src/include/config.h config.status: src/include/config.h is unchanged Rmath.h is unchanged gcc -std=gnu99 -shared -L/usr/local/lib -o libRblas.so blas.o cmplxblas.o -L/usr/local/lib/gcc-lib/x86_64-portbld-freebsd6.0/4.0.3 -lf95 -lm # xerbla.o /usr/bin/ld: /usr/local/lib/gcc-lib/x86_64-portbld-freebsd6.0/4.0.3/libf95.a(ff.o): relocation R_X86_64_32S can not be used when making a shared object; recompile with -fPIC /usr/local/lib/gcc-lib/x86_64-portbld-freebsd6.0/4.0.3/libf95.a: could not read symbols...

...loaded packages are in /tmp/Rtmpq3enyj/downloaded_packages Updating HTML index of packages in '.Library' Warning message: In install.packages("Matrix") : installation of package 'Matrix' had non-zero exit status > > sessionInfo() R version 2.6.1 (2007-11-26) i386-portbld-freebsd7.0 locale: zh_CN.eucCN/zh_CN.eucCN/C/C/C/C attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] rcompgen_0.1-17 tcltk_2.6.1 tools_2.6.1 > R.version _ platform i386-portbld-...

...l-version-check' '--without-openssl' '--with-libxml2=/usr/local' '--with-idn=/usr/local' '--with-libiconv=/usr/local' '--enable-threads' '--prefix=/usr/local' '--mandir=/usr/local/man' '--infodir=/usr/local/info/' '--build=i386-portbld-freebsd7.1' 'build_alias=i386-portbld-freebsd7.1' 'CC=cc' 'CFLAGS=-O2 -fno-strict-aliasing -pipe' 'LDFLAGS= -rpath=/usr/lib:/usr/local/lib' 'CXX=c++' 'CXXFLAGS=-O2 -fno-strict-aliasing -pipe' Jan 27 13:54:08 ns named[36447]: none:0: open: /usr/loc...

...ely located), and have installed (now several times) R 2.11.0 but I cannot get any graphic outputs (everything else seems to be happening fine...) During install I have noticed and checked that png, jpeg, cairo etc libraries are available - here is the build output : R is now configured for amd64-portbld-freebsd8.0 Source directory: . Installation directory: /usr/local C compiler: gcc44 -std=gnu99 -O2 -pipe -Wl,-rpath=/usr/local/lib/gcc44 -fno-strict-aliasing Fortran 77 compiler: gfortran44 -O C++ compiler: g++44 -O2 -pipe -Wl,-rpath=/usr/loc...

...size.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o unique.o util.o version.o vfonts.o xxxpr.o libs/*o ranlib libR.a gcc -std=gnu99 -export-dynamic -L/usr/local/lib -o R.bin Rmain.o libR.a -L../../lib -lRblas -L/usr/local/lib/gcc44/gcc/x86_64-portbld-freebsd9.0/4.4.5 -L/usr/local/x86_64-portbld-freebsd9.0/lib -L/usr/local/lib/gcc44 -lgfortran -lm /usr/local/lib/libintl.so /usr/local/lib/libiconv.so -Wl,-rpath -Wl,/usr/local/lib -lreadline -llzma -lm -liconv -licuuc -licui18n libR.a(sysutils.o)(.text+0x1d5d): In function `R_system': /us...

...ompt"), sep = ""), continue.echo = paste(prompt.prefix, getOption("continue"), sep = ""), verbose = verbose, max.deparse.length = Inf, encoding = encoding, skip.echo = skips) 1: example(lmer) > > sessionInfo() R version 2.6.0 (2007-10-03) i386-portbld-freebsd6.3 locale: C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] lme4_0.99875-9 Matrix_0.999375-2 lattice_0.16-5 loaded via a namespace (and not attached): [1] grid_2.6.0 rcompgen_0.1-15 tools_2.6.0 -- Rongg...

With newest R devel #sessionInfo() R Under development (unstable) (2012-01-10 r58085) Platform: amd64-portbld-freebsd10.0 (64-bit) locale: [1] de_DE.ISO8859-15/de_DE.ISO8859-15/de_DE.ISO8859-15/C/de_DE.ISO8859-15/de_DE.ISO8859-15 attached base packages: [1] stats graphics grDevices utils datasets methods base I get the following error when I try to build and install lubridate from sources on...

Dear Colleagues, I use exim's appendfile transport, procmail and a local mutt on my system, they all (to my knowledge) use lockfiles when working with mboxes. However, `doveconf | grep lock` says dotlock_use_excl = yes lock_method = fcntl mail_max_lock_timeout = 0 mbox_dotlock_change_timeout = 2 mins mbox_lock_timeout = 5 mins mbox_read_locks = fcntl mbox_write_locks = dotlock fcntl

...#39; '--with-dlopen=yes' '--with-openssl=/usr' '--with-libxml2=/usr/local' '--without-idn' '--enable-threads' '--sysconfdir=/etc/namedb' '--prefix=/usr' '--mandir=/usr/share/man' '--infodir=/usr/share/info/' '--build=x86_64-portbld-freebsd9.0' 'build_alias=x86_64-portbld-freebsd9.0' 'CC=cc' 'CFLAGS=-O2 -pipe -fno-strict-aliasing' 'LDFLAGS= -rpath=/usr/lib:/usr/local/lib' 'CPPFLAGS=' 'CPP=cpp' 'CXX=c++' 'CXXFLAGS=-O2 -pipe -fno-strict-aliasing' using OpenSSL v...

...GPL version 3 or later <http://gnu.org/licenses/gpl.html> This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Type "show copying" and "show warranty" for details. This GDB was configured as "x86_64-portbld-freebsd11.0". Type "show configuration" for configuration details. For bug reporting instructions, please see: <http://www.gnu.org/software/gdb/bugs/>. Find the GDB manual and other documentation resources online at: <http://www.gnu.org/software/gdb/documentation/>. For h...

...mac.portacl.port_high: 1023 security.mac.portacl.rules: uid:100:tcp:80 And squid user info: # grep squid /etc/passwd squid:*:100:100:squid caching-proxy pseudo user:/usr/local/squid:/usr/sbin/nologin Also here is cache.log: 2006/10/20 09:55:59| Starting Squid Cache version 2.5.STABLE14 for i386-portbld-freebsd6.1... 2006/10/20 09:55:59| Process ID 6584 2006/10/20 09:55:59| With 11072 file descriptors available 2006/10/20 09:55:59| DNS Socket created at 0.0.0.0, port 59879, FD 5 2006/10/20 09:55:59| Adding nameserver 206.53.60.10 from /etc/resolv.conf 2006/10/20 09:55:59| User-Agent logging is dis...

All, The following IR is causing the assert: \begin{ll} ; ModuleID = 'x.bc' target datalayout = "e-p:64:64:64-i1:8:8-i8:8:8-i16:16:16-i32:32:32- i64:32:64-f32:32:32-f64:64:64-v64:64:64-v128:128:128-a0:0:64- f80:128:128" target triple = "ia64-portbld-freebsd8.0" define void @__ia64_set_fast_math() nounwind { entry: tail call void asm sideeffect "mov.m ar.fpsr=$0", "r"( i64 2709527404217215 ) nounwind ret void } \end{ll} (See gcc/config/ia64/crtfastmath.c) In llvm::TargetLowering::getRegForInlineA...

Dear R List I have a small problem concerning the output of print(). My version: > R.version _ platform i386-portbld-freebsd5.2 arch i386 os freebsd5.2 system i386, freebsd5.2 status major 1 minor 9.0 year 2004 month 04 day 12 language R Consider this: I want to print a backslash with an exclamation mark. Here is the output. > print( "\!" ) [1] "!" Now I try...

...XP. Andrew Robinson was kind enough to try it for me on FreeBSD with the same result. The code returns nothing for me under R 1.9 on Windows 98 and XP (same win. machines). The version details of the three are as follows: # FreeBSD: >version _ platform i386-portbld-freebsd5.3 arch i386 os freebsd5.3 system i386, freebsd5.3 status major 2 minor 0.1 year 2004 month 11 day 15...

...lack lines instead -- and he behavior appears to be consistent for a given data.frame, but I don't seem to be able to predict (for a new data.frame) which behavior I'll get ... and I'm beginning to wonder about what's left of my sanity. :-} > R.Version() $platform [1] "i386-portbld-freebsd8.2" $arch [1] "i386" $os [1] "freebsd8.2" $system [1] "i386, freebsd8.2" $status [1] "" $major [1] "2" $minor [1] "14.1" $year [1] "2011" $month [1] "12" $day [1] "22" $`svn rev` [1] &qu...

...stalled Googling around for some days now it looks like this does not happen to anyone else (at least there are no infos). Does anybody knows what is going on here? Any help would be appreciated, Rainer Hurling sessionInfo() R Under development (unstable) (2011-07-21 r56467) Platform: amd64-portbld-freebsd9.0 (64-bit) locale: [1] de_DE.ISO8859-15/de_DE.ISO8859-15/de_DE.ISO8859-15/C/de_DE.ISO8859-15/de_DE.ISO8859-15 attached base packages: [1] stats graphics grDevices utils methods base

FreeBSD 4.8-STABLE #1: Sun Apr 6 09:38:34 EDT 2003 # $FreeBSD: ports/www/squid/Makefile,v 1.99 2003/03/09 10:59:07 netchild Exp $ ... checking if IP-Filter header files are installed... no WARNING: Cannot find necessary IP-Filter header files Transparent Proxy support WILL NOT be enabled ... I seem to recall that ipf doesn't install its includes per default any longer ? Perhaps

...ory of the > archive attached in both bug reports: > > http://llvm.org/bugs/show_bug.cgi?id=15188 > http://llvm.org/bugs/show_bug.cgi?id=15189 $ llvm-tblgen --version LLVM (http://llvm.org/): LLVM version 3.1 Optimized build. Built Oct 17 2012 (19:26:30). Default target: amd64-portbld-freebsd8.3 Host CPU: core2 > ==== > 1) First test case: crashing > ==== > > $ ./llvm-tblgen -gen-tgt-intrinsic NVPTX1.td > > assert(iid <= Intrinsic::0  llvm-tblgen     0x00000000005c56b6 > 1  llvm-tblgen     0x00000000005c54b2 > 2  libpthread.so.0 0x00007fc73464...

...'--with-dlz-bdb=yes' '--with-dlz-ldap=yes' '--with-dlz-filesystem=yes' '--with-dlz-stub=yes' '--without-gost' '--enable-threads' '--prefix=/usr/local' '--mandir=/usr/local/man' '--infodir=/usr/local/info/' '--build=amd64-portbld-freebsd10.2' 'build_alias=amd64-portbld-freebsd10.2' 'CC=cc' 'CFLAGS=-O2 -pipe -isystem /usr/local/include -DLIBICONV_PLUG -fstack-protector -DLDAP_DEPRECATED -fno-strict-aliasing' 'LDFLAGS= -L/usr/local/lib -Wl,-rpath,/usr/local/lib/heimdal:/usr/lib -fstack-prot...

...ub.f -o rfsub.o gcc -std=gnu99 -I/usr/local/lib/R/include -I/usr/local/lib/R/include -I/usr/local/include -fpic -g -O2 -c rfutils.c -o rfutils.o gcc -std=gnu99 -shared -L/usr/local/lib -o randomForest.so classTree.o regTree.o regrf.o rf.o rfsub.o rfutils.o -L/usr/local/lib/gcc-4.2.2/gcc/i386-portbld-freebsd7.0/4.2.2 -L/usr/local/lib/gcc-4.2.2 -lgfortran -lm -lgcc_s -L/usr/local/lib/R/lib -lR /usr/bin/ld: cannot find -lgfortran *** Error code 1 Stop in /tmp/R.INSTALL.QXafuj/randomForest/src. ERROR: compilation failed for package 'randomForest' ** Removing '/usr/local/lib/R/library...