search for: polypeptid

Displaying 8 results from an estimated 8 matches for "polypeptid".

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2007 May 23
2
problem with read.table
...sarcoma amplified sequence 6303 spermidine/spermine N1-acetyltransferase 6304 special AT-rich sequence binding protein 1 (binds to nuclear matrix/scaffold-associating DNA's) 6305 SET binding factor 1 6307 sterol-C4-methyl oxidase-like 6625 Small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen) 6626 small nuclear ribonucleoprotein polypeptide A 6627 small nuclear ribonucleoprotein polypeptide A' 6628 small nuclear ribonucleoprotein polypeptides B and B1 6629 Small nuclear ribonucleoprotein polypeptide B'' when I use > test <- read.table("...
2010 Jan 21
1
Merging and extracting data from list
Hello R-help group, I have a question about merging lists. I have two lists: Genes list (hSgenes) name chr strand start end transStart transEnd symbol description feature ENSG00000223972 1 1 11874 14412 11874 14412 DEAD/H box polypeptide 11 like 1DEAD/H box polypeptide 11 like 3DEAD/H box polypeptide 11 like 9 ;; [Source:UniProtKB/TrEMBL;Acc:B7ZGX0] gene ENSG00000227232 1 -1 14363 29570 17551 29343 WASH5P WAS protein family homolog 5 pseudogene (WASH5P), non-coding RNA [Source:RefSeq DNA;Acc:NR_024540...
2003 Sep 08
2
Re: clustering polypeptide sequences
Hi Peter, You didn't give a very specific example, but it seems to me that what you wish to do is not really complicated. I suppose you have created a table of sequences vs. say hyprophobicity, charge, etc..., something like... seq hydroph arom b0001 0.104762 0.000000 b0002 0.035122 0.065854 b0003 0.024193 0.070968 b0004 -0.096729 0.084112 b0005 -0.973469 0.091837 b0006
2009 Dec 17
2
some help regarding combining columns from different files
Dear all, Here is my code which am using to combine 5th column from different data sets. Here is the function to do my job genesymbol.append.file <-NULL gene.column <- NULL readGeneSymbol <- function(files,genesymbol.column=5){ for(i in fnames){ temp <- read.table(fnames,header=T,sep="\t",stringsAsFactors=F,quote="\"")
2017 Sep 19
3
remove quotes from matrix
...alonate", "Monoacylglycerol", "Nicotinate_and_Nicotinamide", "Oxidative_Phosphorylation", "Pantothenate_and_CoA", "Pentose", "Phenylalanine_and_Tyrosine", "Phospholipid", "Plasmalogen", "Polyamine", "Polypeptide", "Polyunsaturated_Fatty_Acid_(n3_and_n6)", "Primary_Bile_Acid", "Purine,_(Hypo)Xanthine/Inosine_containing", "Purine,_Adenine_containing", "Purine,_Guanine_containing", "Pyrimidine,_Cytidine_containing", "Pyrimidine,_Orotate_co...
2017 Sep 19
0
remove quotes from matrix
..."Monoacylglycerol", "Nicotinate_and_Nicotinamide", > "Oxidative_Phosphorylation", "Pantothenate_and_CoA", "Pentose", > "Phenylalanine_and_Tyrosine", "Phospholipid", "Plasmalogen", > "Polyamine", "Polypeptide", "Polyunsaturated_Fatty_Acid_(n3_and_n6)", > "Primary_Bile_Acid", "Purine,_(Hypo)Xanthine/Inosine_containing", > "Purine,_Adenine_containing", "Purine,_Guanine_containing", > "Pyrimidine,_Cytidine_containing", > "Py...
2017 Sep 19
0
remove quotes from matrix
On 19/09/2017 9:47 AM, greg holly wrote: > Hi all; > > I have data at 734*22 dimensions with rows and columns names are > non-numeric.When I convert this data into matrix then all values show up > with quotes. Then when I use > x1= noquotes(x) to remove the quotes from the matrix then non-numeric row > names remain all other values in matrix disappear. > > Your help is
2017 Sep 19
3
remove quotes from matrix
Hi all; I have data at 734*22 dimensions with rows and columns names are non-numeric.When I convert this data into matrix then all values show up with quotes. Then when I use x1= noquotes(x) to remove the quotes from the matrix then non-numeric row names remain all other values in matrix disappear. Your help is greatly appreciated. Greg [[alternative HTML version deleted]]