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...l. > > here you go, it?s pretty much the simplest package possible that > needs C++11: > > https://github.com/flying-sheep/cxx11test This works for me (See below). Make sure you are not overwriting some key variables in a personal Makevars file or a site-wide Makevars.site file. [plummerm at D-160182 temp]$ ~/R-devel/r-devel/build/bin/R CMD INSTALL cxx11test_1.0.tar.gz? * installing to library ?/home/plummerm/R-devel/r-devel/build/library? * installing *source* package ?cxx11test? ... ** libs g++ -std=gnu++11 -I/home/plummerm/R-devel/r-devel/build/include -DNDEBUG??-I"/home/plu...

Hi Dirk and Martyn, > That looks fine. Can you please give a reproducible example of a package > that compiles correctly on R 3.3.3 but not with R 3.4.0 or R-devel. here you go, it?s pretty much the simplest package possible that needs C++11: https://github.com/flying-sheep/cxx11test > Maybe you can share with us how you configure the build of R-devel? Sure, in the mail you quoted, I

On Thu, 21 Apr 2016 08:23:32 +0000 Martyn Plummer <plummerm at iarc.fr> wrote: > From: Martyn Plummer <plummerm at iarc.fr> > To: "cireyapmin at gmail.com" <cireyapmin at gmail.com>, > "r-sig-fedora at r-project.org" <r-sig-fedora at r-project.org> Subject: > Re: [R-sig-Fedora] Cannot Run On The Command...

Dear Martyn, Thank you so much for your suggestion. Can I install R by rpm WITHOUT Internet? This Linux server cannot connect to web. Best Regards Wei Ning Ctrip, Shanghai -----????----- ???: Martyn Plummer [mailto:plummerm at iarc.fr] ????: 2017?2?7? 17:17 ???: r-sig-fedora at r-project.org; nw?? <wning at Ctrip.com> ??: Re: [R-sig-Fedora] how can I know the version of my zlib checked by R On Tue, 2017-02-07 at 08:39 +0000, nw?? wrote: > Hi, professors > > ?????????I'd like to install R-3.3.2 fr...

----Original Message----- From: Martyn Plummer [mailto:plummerm at iarc.fr] Sent: Thursday, January 12, 2017 3:36 AM To: Weiner, Michael <weinerm at ccf.org>; r-sig-fedora at r-project.org Subject: Re: [R-sig-Fedora] rgl >One possibility is that you have the 32-bit version of mesa-libGL-devel installed. This will provide the headers but not the 64-bi...

On Wed, 20 Apr 2016 20:50:57 +0000 "Ellen K" <keyes at pushyes.xyz> wrote: > From: "Ellen K" <keyes at pushyes.xyz> > To: cireyapmin at gmail.com > Subject: RE: [R-sig-Fedora] Cannot Run On The Command Line > Date: Wed, 20 Apr 2016 20:50:57 +0000 > X-Mailer: iPad Mail (12H143) > > Hi virgo, > > Thank you for your interest in the

Dear Martyn, On Fr, Jan 15, 2016 at 4:01 , Martyn Plummer <plummerm at iarc.fr> wrote: > > Alternatively, you may be able to control the maximum number of > threads > by setting and exporting an appropriate environment variable depending > on what backend you are using, e.g. OPENBLAS_NUM_THREADS or > MKL_NUM_THREADS. Thanks a lot. Running...

...ro values other > > > than INT_MIN are mapped to TRUE.) > > > > The parenthetical seems to suggest that something like 'LOGICAL(x)[0] > > = 2;' will be treated as TRUE, which it sometimes is, and sometimes > > isn't: > > From: Martyn Plummer <plummerm at iarc.fr> > The title of Section 5.2 is "Interface functions .C and .Fortran" and > the text above refers to those interfaces. It explains how logical > vectors are mapped to C integer arrays on entry and back again on exit. > > This does work as advertised. Not a...

C++ support across different platforms is now very heterogeneous. The standard is evolving rapidly but there are also platforms in current use that do not support the recent iterations of the standard. Our goal for R 3.4.0 is to give as much flexibility as possible. The default compiler is whatever you get "out of the box" without setting the "-std=" flag. This means different

-----Original Message----- From: Martyn Plummer [mailto:plummerm at iarc.fr] Sent: Thursday, January 12, 2017 7:41 AM To: Weiner, Michael <weinerm at ccf.org>; r-sig-fedora at r-project.org Subject: Re: [R-sig-Fedora] rgl >> configure:4429: checking for glEnd in -lGL >> configure:4454: gcc -o conftest -g -O2??-DHAVE_PNG_H >> -I/usr/incl...

...dal? Warning in install.packages : installation of package ?rgdal? had non-zero exit status The downloaded source packages are in ?/tmp/Rtmpeaf9P4/downloaded_packages? > ------------------- I tried to install gdal -dev and gdal but it is impossible. Regards, Manuel Martyn Plummer <plummerm at iarc.fr> escribi?: > You don't say exactly what the problem is, but I can give you some > general advice. > > The first thing to check on any RPM-based system is that you have the > appropriate development package installed, in this case gdal-devel. > > I see that EL...

...ags") Description: Package:????????????? rjags Version:????????????? 4-6 Date:???????????????? 2016-02-19 Title:??????????????? Bayesian Graphical Models using MCMC Authors at R:??????????? c(person("Martyn", "Plummer", role=c("aut","cre"), email="plummerm at iarc.fr"), person("Alexey", "Stukalov", role="ctb"), ????????????????????? person("Matt", "Denwood", role="ctb")) Depends:????????????? R (>= 2.14.0), coda (>= 0.13) SystemRequirements:?? JAGS 4.x.y URL:????????????????? htt...

Martyn Plummer <plummerm <at> iarc.fr> writes: > > I think this is covered well by the CRAN repository policy: > http://cran.r-project.org/web/packages/policies.html > > The two key license requirements are that: > 1) CRAN must have a perpetual license to distribute the package > 2) The p...

> On 18 May 2017, at 14:58 , Martyn Plummer <plummerM at iarc.fr> wrote: > > > >> On 18 May 2017, at 14:51, peter dalgaard <pdalgd at gmail.com> wrote: >> >> >>> On 18 May 2017, at 13:47 , Joris Meys <jorismeys at gmail.com> wrote: >>> >>> Correction: Also dlt uses the default...

Hi! Well, my linux distribution has very recent versions of everything, so a working C++11 compiler exists: $ gcc --version | head -n1 gcc (GCC) 6.3.1 20170306 Could wrong ./configure options be at fault here? See: https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=r-devel#n40 My sessionInfo(): $ R-devel --slave -e 'sessionInfo()' | head -n3 R Under development (unstable)

...entifying missing dependencies (yum will tell you) transferring the corresponding RPMs to the server and installing them. But it will still be better than installing from source. Martyn > Best Regards > > Wei Ning > Ctrip, Shanghai > -----????----- > ???: Martyn Plummer [mailto:plummerm at iarc.fr]? > ????: 2017?2?7? 17:17 > ???: r-sig-fedora at r-project.org; nw?? <wning at Ctrip.com> > ??: Re: [R-sig-Fedora] how can I know the version of my zlib checked > by R > > On Tue, 2017-02-07 at 08:39 +0000, nw?? wrote: > > > > Hi, professors > &gt...

Hello, when I want to install H misc and rms using Fedora 26. I receive the following error message: Error: package or namespace load failed for ?Hmisc? in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/usr/lib64/R/library/Hmisc/libs/Hmisc.so': libgfortran.so.3: cannot open shared object file: No such file or directory Scanning the R-help several other users

> > On 18 May 2017, at 14:58 , Martyn Plummer <plummerM at iarc.fr> wrote: > > > >> On 18 May 2017, at 14:51, peter dalgaard <pdalgd at gmail.com> wrote: > >>> On 18 May 2017, at 13:47 , Joris Meys <jorismeys at gmail.com> wrote: > >>> > >>> Correction: Also dlt uses the default timezo...

...ed R library, R profiling Capabilities skipped: Options not enabled: shared BLAS, memory profiling Recommended packages: yes ----- Urspr?ngliche Mail ----- Von: "Angerer, Philipp" <philipp.angerer at helmholtz-muenchen.de> An: "Martyn Plummer" <plummerm at iarc.fr> CC: "r-devel" <r-devel at r-project.org> Gesendet: Mittwoch, 19. April 2017 12:42:33 Betreff: Re: [Rd] R 3.4 has broken C++11 support Hi! Well, my linux distribution has very recent versions of everything, so a working C++11 compiler exists: $ gcc --version | he...

On Thu, 2017-01-12 at 12:29 +0000, Weiner, Michael wrote: > ----Original Message----- > From: Martyn Plummer [mailto:plummerm at iarc.fr]? > Sent: Thursday, January 12, 2017 3:36 AM > To: Weiner, Michael <weinerm at ccf.org>; r-sig-fedora at r-project.org > Subject: Re: [R-sig-Fedora] rgl > > > > > One possibility is that you have the 32-bit version of mesa-libGL-devel installed. This will...