search for: plotpc

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2010 May 15
2
Attempt to customise the "plotpc()" function
Dear R-list, Among the (R-)tools, I've seen on the net, for (bivariate) Principal Component scatter plots (+histograms), "plotpc" [1] is the one I like most. By default it performs PCA on a bivariate dataset based on R's "princomp()" (which is the eigenvector-based algebraic solution to PCA). I would like to modify "plotpc()" in order be able, as an end-user, to define whether the PCA should...
2010 Jun 28
2
Note on PCA (not directly with R)
Dear all, I am looking for some interactive study materials on Principal component analysis. Basically I would like to know what we are actually doing with PCA? What is happening within the dataset at the time of doing PCA. Probably a 3-dimensional interactive explanation would be best for me. I have gone through some online materials specially Wikipedia etc, however what I need a "movable
2010 Jun 30
3
Factor Loadings in Vegan's PCA
Hi all, I am using the vegan package to run a prcincipal components analysis on forest structural variables (tree density, basal area, average height, regeneration density) in R. However, I could not find out how to extract factor loadings (correlations of each variable with each pca axis), as is straightforwar in princomp. Do anyone know how to do that? Moreover, do anyone knows