search for: plot1

Displaying 20 results from an estimated 94 matches for "plot1".

Did you mean: plot
2007 Dec 26
1
seekViewport error
Why does the seekViewport at the bottom give an error? > xyplot(Sepal.Length ~ Sepal.Width, iris, group = Species, col = 11:13, + auto.key = TRUE) > grid.ls(view = TRUE) ROOT GRID.rect.89 plot1.toplevel.vp plot1.xlab.vp plot1.xlab 1 plot1.ylab.vp plot1.ylab 1 plot1.strip.1.1.off.vp GRID.segments.90 1 plot1.strip.left.1.1.off.vp GRID.segments.91 GRID.text.92 1 plot1.panel.1.1.off.vp GRID.segments.93 GRID....
2008 Nov 11
1
Retrieving x argument name from a trellis object in R 2.8.0
Dear all, let consider the following function: Fun1 <- function() { library(lattice) plot1 <- 1:10~1:10 pl1 <- xyplot(plot1) return(pl1$call$x) } In R 2.5.0 (or older version) we have > Fun1() plot1 but starting from R 2.5.1 until the latest R 2.8.0 we obtain instead > Fun1() NULL because pl1$call seems to be equal to xyplot() without arguments. Something like xy...
2007 May 31
4
Aggregate to find majority level of a factor
I want to use the aggregate function to summarize data by a factor (my field plots), but I want the summary to be the majority level of another factor. For example, given the dataframe: Plot1 big Plot1 big Plot1 small Plot2 big Plot2 small Plot2 small Plot3 small Plot3 small Plot3 small My desired result would be: Plot1 big Plot2 small Plot3 small I can't seem to find a scalar function that will give me the majority level. Thanks in adva...
2005 Dec 26
4
lme X lmer results
Hi, this is not a new doubt, but is a doubt that I cant find a good response. Look this output: > m.lme <- lme(Yvar~Xvar,random=~1|Plot1/Plot2/Plot3) > anova(m.lme) numDF denDF F-value p-value (Intercept) 1 860 210.2457 <.0001 Xvar 1 2 1.2352 0.3821 > summary(m.lme) Linear mixed-effects model fit by REML Data: NULL AIC BIC logLik 5416.59 5445.256 -2702.295 Random effect...
2003 Oct 19
2
problem with win.metafile( ): traceback()
For the first error message: > win.metafile(file = "//.../plot1.wmf", + width = 8.5, height = 6.25) > lset( list( background = list(col = "white"))) Error in get(x, envir, mode, inherits) : variable "win.metafile://.../plot1.wmf" was not found > traceback() 4: get(device) 3: trellis.device(device = .Device, new = FALSE) 2: trel...
2011 Jul 19
5
multiple plots in single frame: 2 upper, 1 lower
Hi, par(mfrow = c(2,2)) will create a 2x2 window that I can use to plot 4 diferent figures in: [plot1 plot2] [plot3 plot4] But how can do 3 so that the bottom spans the width of the upper two: [plot1 plot1] [p l o t 3] Is this possible in R? -- View this message in context: http://r.789695.n4.nabble.com/multiple-plots-in-single-frame-2-upper-1-lower-tp3679574p3679574.html Sent from the R he...
2010 Aug 20
3
if-else function
...o characterize different plots containing counts of variables (here parasites). If a plot has a count equal or higher than 4 for any parasite the function should return a 1 else a 0. Later I can loop the function over all plots. Here I have a little subset of my data: VariablePAR Plot1 Plot2 Plot3 Plot4 ParasiteA 3 1 1 4 ParasiteB 1 2 3 5 ParasiteC 2 1 1 3 ParasiteD 2 1 1...
2004 Sep 09
2
Skipping panels in Lattice
..."C1","C2")), dv=rpois(15*3*4*2,10)) # now get rid of the cell B4 & C1 to simulate a missing treatment combination df2 <- df1[df1$facb !="B4" | df1$facc !="C1", ] # plain vanilla lattice plot generates an empty panel corresponding to the empty cell plot1 <- bwplot( dv ~ faca | facb*facc, data=df2) plot1 # now try to skip the empty panel # turn plot history on so that the separate pages can be recalled plot2 <- update(plot1, skip=c(rep(F, 3), T, rep(F, 4))) plot2 and the 4th panel position of the bottom row is skipped, BUT the B4&C1 cel...
2008 Jan 25
4
Function for translation of a list into a matrix as used by ordination?
Hello. Does anyone know of an existing function that takes a list in the form of: Plot1 Species1 Abundance1 Plot1 Species2 Abundance2 Plot2 Species1 Abundance1 Plot2 Species3 Abundance3 . . . PlotN SpeciesN AbundanceN and translates into a matrix in the form of Species1 Species2.... SpeciesN Plot1 Abundance1 Abundance2... AbundanceN Plot2 Abundance1...
2008 Sep 19
1
Lines between panels in lattice
Hello, I have a multi-page display each consisting of two-panels above each other. I need to draw a line from the top panel to bottom panel. Using current.vpTree() i find that "plot1.panel.1.2.vp" and "plot1.panel.1.1.vp" are the top and bottom ones respectively. I am using the following code(inspired by Paul Murrell's R Graphics) to draw a line. (All the co-ordinates lie well within the ranges of the respective panels) seekViewport("plot1.panel.1...
2007 Dec 11
2
ggplot - Setting the y-scale in a bar plot
...ould like to have a set of plots all with the same y-axis height. But I do not seem to find out how to fix the scale of the y-axis in this case. Any tips? Using R 2.6.1 on Windows. Thanks for any help, Pedro I attach below the code I am using: plotdata<-data.frame(x=factor(2:8), y=0.1*(2:8)) plot1<-ggplot() plot1<-plot1+layer(data=plotdata, mapping=aes_string(x='x',y='y'),geom='bar', stat='identity') RangeY <-c(0,1) YBreaks <- (0:10)*diff(RangeY)/10 YTickLabels<- as.character(YBreaks) plot2 <- plot1 + scale_y_continuous(limits=RangeY, brea...
2012 Dec 13
3
Repeat elements of matrix based on vector counts
...df based on how many times "plot.id" is repeated in the 1st df (all plots are repeated a different number of times). My example dfs are below: ************************************************************************************************ df1 <- data.frame(plot.id = rep(c("plot1", "plot2", "plot3"), c(3,2,5)), tree.tag = c(111,112,113,222,223,333,334,335,336,337)) df2 <- data.frame(plot.id = c("plot1", "plot2", "plot3"), load=c(17, 6, 24)) ******************************************************...
2008 Nov 24
3
multiple plots in R
Hi, I just try to draw multiple plots in one page using R, I used par command. For example I have 7 plots, but instead of arranging them in the default way plot1 plot2 plot3 plot4 plot5 plot6 plot7 I want them in this order plot1 plot2 plot3 plot4 plot5 plot6 plot7 Could somebody tell me how to do this, please? Thanks so many. Suyan
2004 Feb 20
1
unexpected postscript output with par(mfg)
...ode produces a working plot (no problems, as far as I can see): par(mfrow = c(2,2)) plot.new() plot(1:10, 1:10, xlab = "", ylab = "") plot(1:10, 1:10, xlab = "", ylab = "") plot(1:10, 1:10, xlab = "", ylab = "") dev.copy2eps(file = "plot1.eps") However, the following code, which appears on the screen to be identical to the above plot, generates an EPS file which ghostview/gv displays as blank. par(mfrow = c(2,2), mfg = c(1,2)) plot(1:10, 1:10, xlab = "", ylab = "") plot(1:10, 1:10, xlab = "", y...
2006 Mar 19
2
tick mark intervals
...is is the same for all of them but the y-axis is different. What I would like to do is to have a different range of the y-axis and different intervals between tick marks. BUT I would like to have the same number of tick marks and I would like the y-axis to look the same. EXAMPLE (with two plots): plot1: number of tick marks = 11 interval between tick marks = 5 (i.e. tick marks at 0,5,10,15, etc.) range of y-axis = (0, 50) plot2: number of tick marks = 11 interval between tick marks = 10 (i.e. tick marks at 0,10,20,etc.)...
2012 May 10
6
averaging two tables (rows with columns)
...rateful- I am spending so much time to figure it out. It should not be so hard, I think. I have very big data but I have created a hypothetical data for simplification. for example I have : table 1 table 1: species occurance data speciesX speciesY speciesZ speciesXX Plot1 1 0 1 0 Plot2 0 1 1 0 Plot3 0 0 0 1 Plot4 1 0 1 0 Table 2 table 2. species tolerance data EnviA EnviB EnviC speciesX 0.21 0.4 0.17 speciesY 0.1 0.15 0.18 speciesXX 0.14 0.16 0.19 You may noticed tha...
2010 Jun 30
5
plot focus
...the results by adding a point to each of 2 charts at the end of the loop. Its very informative as you can see the progression through time. My problem is, if I have 2 plots, I don't know how to get the focus back to the first plot. layout(matrix(c(1,2))) plot(iris[,1],col="red",) #plot1 plot(iris[,3],col="blue") #plot2 #goes on plot2 lines(iris[,2],col="pink") #how do I put this line on plot 1 lines(iris[,4],col="black") I tried the method below but when you switch the focus back to screen 1 the line gets drawn not where I expect split.screen(c...
2008 Sep 19
0
Fwd: Lines between panels in lattice
...)) > xyplot(x[,2]~x[,1]|x[,3],layout=c(1,2)) > x > > #x[,3]==2 is in the top panel and x[,3]==1 is in the bottom panel > #so x[6:,] onwards is on the top panel and x[1:5,] is in the bottom > #to find out the names of the viewports, use current.vpTree() > > seekViewport("plot1.panel.1.2.off.vp") > grid.move.to(unit(x[10,1],"native"),unit(x[10,2],"native")) > seekViewport("plot1.panel.1.1.off.vp") > grid > .line > .to > (unit > (x[1,1],"native"),unit(x[1,2],"native"),gp=gpar(col='#aaaaaa',...
2009 Apr 08
1
Tinn-R pdf()
Dear R and Tinn-R users, i recently switched to Tinn-R and sending code to R works fine (R 2.8.1, Tinn-R 2.2.0.2, OS Windows XP). However, i encountered a problem when trying to send plots to pdf files like this: library(lattice) pdf("plot1.pdf") PLOT<-(xyplot, ...) PLOT dev.off() The file "plot1.pdf" is created, but it is empty. If i paste the code above directly into the R console and run it, the file "plot1.pdf" is created and in this case contains "PLOT". I guess that some settings in Tinn-...
2009 Apr 14
2
subset dataframe by rows using character vector?
...lling to help me out. I queried a dataframe which returns a character vector called "plot". I have another dataframe from which I want to subset or select only those rows that match "plot". I've tried subset, and also the "which" command. plot <- c("plot1", "plot2", "plot3") # character vector used to select rows from data # create fake data from to try out subset v1 <- c(2,5,6,4,3) PLOTID <- c("plot1", "plot2", "plot3", "plot4", "plot5") full.data &...