search for: ploson

Hi all, I'm currently preparing some figures that will be submitted to PloS One. In their guidelines they state that they will only accept figures in tiff or eps format, with the warning that eps figures will be converted to tiff format ( see http://www.plosone.org/static/figureGuidelines.action ). Because of this conversion, I figured I'd generate tiff-format figures from the beginning. However, a number of issues cropped up: 1) using library(Cairo) CairoTIFF("test.tif") I get " Sorry, this Cairo was compiled without tiff support.&...

...is) available on CRAN. Major updates are: - catch errors arising in GRASS 7.8 due to changes in v.to.db - update setup_grass_environment; there is no need any more to initGRASS before Please also find a detailed description of the package including example code here: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0239237 Any comments, suggestions or bug reports are welcome on https://github.com/MiKatt/openSTARS All the best, Mira -- Dr. Mira Kattwinkel Quantitative Landscape Ecology iES Landau, Institute for Environmental Sciences University of Koblenz-Landau Fortstra...

...ch component which are combined under Bliss independence. A description of the motivation for the package is published in: Saul A, Fay MP (2007). Human Immunity and the Design of Multi-Component, Single Target Vaccines. PLoS ONE 2(9): e850. doi:10.1371/jounal.pone.0000850 (Available at http://www.plosone.org/) Please let me know if you have any comments about or corrections for the package. Thanks, Mike ****************************************************************** Michael P. Fay, PhD Mathematical Statistician National Institute of Allergy and Infectious Diseases Tel: 301-451-5124...

...ch component which are combined under Bliss independence. A description of the motivation for the package is published in: Saul A, Fay MP (2007). Human Immunity and the Design of Multi-Component, Single Target Vaccines. PLoS ONE 2(9): e850. doi:10.1371/jounal.pone.0000850 (Available at http://www.plosone.org/) Please let me know if you have any comments about or corrections for the package. Thanks, Mike ****************************************************************** Michael P. Fay, PhD Mathematical Statistician National Institute of Allergy and Infectious Diseases Tel: 301-451-5124...

...of Adobe Acrobat and Adobe Reader have built-in support for 3D models in PDF. You can take a look at http://www.pdf3d.com/gallery.php for a gallery of professional results achieved with a commercial tool. For an overview of what 3D PDF can be used for I (naturally) suggest the article http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0069446 . To bring together 3D PDF and R, I have enhanced "rgl" package with necessary output routine, so you draw something in 3D using rgl and after that say "save it as 3D PDF". The resulting 3D PDF model can be used standalon...

...variance explained. Environmental Modelling & Software 80 1-8. http://www.sciencedirect.com/science/article/pii/S136481521630024X. Li, J., 2017. Assessing the accuracy of predictive models for numerical data: Not r nor r2, why not? Then what? PLOS ONE 12 (8): e0183250. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0183250. The package, spm, can be downloaded from CRAN now.? Any feedback and comments are much appreciated! Kind regards, Jin Jin Li, PhD | Spatial Modeller / Computational Statistician National Earth and Marine Observations | Environmental Geoscience Divisio...

...useful link https://rseek.org/ and https://www.r-bloggers.com/calculating-auc-the-area-under-a-roc-curve/. Actually, I want to know different performance between Stata and R, in multilevel logistic regression. For this purposes, I replicate ".do" file use Stata in http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0153778. The nice journal not only gives ".do" file but also ".dta" file for Stata user. Fyi, I succeed running my dataset accordingly approach that use in the nice article. In Model ii, by adding the random effects of the clusters (neighbourhoo...