search for: phylog

Dear Colleagues, We are using the phylog.gls.fit() function from the R package "PHYLOGR" (Diaz-Uriarte R, Garland T: PHYLOGR: Functions for phylogenetically based statistical analyses. 2007. Available at [http://cran.r-project.org/web/packages/PHYLOGR/index.html]) to correct for lack of independence between data points. (In our...

...-fpic -g -O2 -c adesub.c -o adesub.o gcc -std=gnu99 -I/usr/share/R/include -fpic -g -O2 -c divsub.c -o divsub.o gcc -std=gnu99 -I/usr/share/R/include -fpic -g -O2 -c fourthcorner.c -o fourthcorner.o gcc -std=gnu99 -I/usr/share/R/include -fpic -g -O2 -c phylog.c -o phylog.o gcc -std=gnu99 -I/usr/share/R/include -fpic -g -O2 -c testamova.c -o testamova.o gcc -std=gnu99 -I/usr/share/R/include -fpic -g -O2 -c testdim.c -o testdim.o gcc -std=gnu99 -I/usr/share/R/include -fpic -g -O2 -c testrlq.c -o testrlq.o...

Dear list, I am trying to plot a radial dendrogram using the ape package, which requires my data to be of class 'phylo'. Currently I have my dendrogram stored as an object of class 'dendrogram' which was produced from an outside bit of C code, but was made into an object of class 'igraph.eigenc' and converted to a dendrogram using 'as.dendrogram()' from the igraph