Displaying 2 results from an estimated 2 matches for "phenofil".
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phenofile
2012 Aug 24
0
A question about GRAMMAR calculations in the FAM_MDR algorithm
...algorithms and the sample datasets
are available at
http://www.statgen.ulg.ac.be/index.php?option=com_content&view=article&id=90&Itemid=85.
The R I used is R-2.15.1 in the Windows XP system.
The command lines I have run are as follows:
# data files
pedfile="pedigree1.ped"
phenofil="pheno1.dat"
mapfile="simulation.map"
# solver settings
npermute = 1000 # fixed number of permutations, 1000 is
recommended
alpha = 0.05 # type-I error
Pval = 0.1 # significance level at first step of
mbmdr
set.se...
2010 Feb 24
6
R error- "more columns than column names"
Hi all! I am desperately trying to figure out the solution to this error, but
nothing as of yet is working.
As noted in an earlier post I am using GenABEL. In an attempt to read in
the phenotype file, in the format .dat, R keeps giving me the error "more
columns than column names"
I have tried to read in the data without the headers; I have also tried to
trim the data to remove any