search for: pha

Dear all, I am trying to get a PERMANOVA with quite large data set. I am reading a lot about this question, but I do not get the answer about it. Although I know that the R function is adonis () (vegan package), it does not work: adonis(Pha.env~SPha, data=Pha, permutations=10) The error message: Error: cannot allocate vector of size 334.2 Mb In addition: Warning messages: 1: In vegdist(lhs, method = method, ...) : Reached total allocation of 1535Mb: see help(memory.size) 2: In vegdist(lhs, method = method, ...) : Reached total a...

...n experienced user of the 'nlme' package but I ran into a curious problem recently that I couldn't find on the mailing list anywhere. I have simple function which calls 'groupedData' and 'nlme': g <- function(dataset) { unig <- groupedData(logfv ~ Vs+v1+v2+v3+PHA| EQ, data=dataset) modelfv <- nlme(logfv~a + c*log(Vs/a1)+ b1*( v1 + v2*(Vs-300)^2/(300-120)^2 )*log(PHA/0.1) + b2*( v3 + v2 + (-1*v2)*(Vs-300)^2 /(300-120)^2)*log(PHA/0.1), data=unig, fixed=a1+c+b1+b2~1, random=a~1|EQ , start...

...s ghlt for a lme model. My first attempt at doing so gave me an output, HOWEVER I have tried to do this again, it keeps coming up with the error: (Error in contrMat(table(mf[[nm]]), type = types[pm]) : less than two groups) My model is looking at effect of incubation temperature (3 groups) on PHA with hen as a my random factor. Temperature treatment has been made factorial (Tempfact). my code is as follows: library(multcomp) > PHA <- lme(DiffPHA48 ~ Tempfact, random= ~1|Hen, na.action=na.omit) > summary(glht(PHA, linfct=mcp(Tempfact = "Tukey"))) Error in contrMat(table...

...efore >> it wraps around and silently clobbers itself. It means single byte values >> will be incredibly inefficient... Tricky stuff. >> > > You absolutely don't want anything on the hardware stack except function > return addresses and possibly very temp storage e.g. PHA (push A); do > something that destroys A, PLA (pull A). Or you could use a ZP temp for > that. STA ZP; LDA ZP is I think cycle or two faster, PHA/PLA is two bytes > smaller ... size usually wins. > > The "C" local variables stack absolutely needs to be somewhere else, >...

...s support = no debug level = 1 guest ok = no inherit permissions = yes username map = /etc/samba/smbusers ------------------------------------- -- Alainna C. White Johns Hopkins University Physics & Astronomy, 3701 San Martin Drive, Baltimore MD 21218 Voice: 410 516 4536 | Email: alainna@pha.jhu.edu http://skysrv.pha.jhu.edu/~alainna

...am happy to take change suggestions, especially if it will save folks significant time. For the rest, I'll reply inline below... On Mon, Mar 5, 2018 at 10:39 PM, Raghavendra Gowdappa <rgowdapp at redhat.com> wrote: > +Csaba. > > On Tue, Mar 6, 2018 at 2:52 AM, Paul Anderson <pha at umich.edu> wrote: >> >> Raghavendra, >> >> Thanks very much for your reply. >> >> I fixed our data corruption problem by disabling the volume >> performance.write-behind flag as you suggested, and simultaneously >> disabling caching in my client...

On Tue, Mar 6, 2018 at 10:22 PM, Paul Anderson <pha at umich.edu> wrote: > Raghavendra, > > I've commited my tests case to https://github.com/powool/gluster.git - > it's grungy, and a work in progress, but I am happy to take change > suggestions, especially if it will save folks significant time. > > For the rest, I&...

Well, the stack pointer be a single byte, so pushing things on there doesn't work terribly well. Assuming I pass by reference, that's 128 values absolutely total before it wraps around and silently clobbers itself. It means single byte values will be incredibly inefficient... Tricky stuff. I'm lucky on the C64 since it's rare to exit back to the kernel with machine language apps

...i's method when he studied Strange Attractors and Initial TCP/IP Sequence Numbers: http://lcamtuf.coredump.cx/newtcp/ https://pdfs.semanticscholar.org/ adb7/069984e3fa48505cd5081ec118ccb95529a3.pdf The technique works by mapping the dynamics of the generated numbers into a three-dimensional phase space. This is then plotted in a graph so that you can visually see if something odd is going on. I used runif(10000, min = 0, max = 65535) to get a set of numbers. This is the resulting plot that was generated from R's numbers using this technique: http://people.redhat.com/sgrubb/file...

On Tue, Mar 6, 2018 at 10:58 PM, Raghavendra Gowdappa <rgowdapp at redhat.com> wrote: > > > On Tue, Mar 6, 2018 at 10:22 PM, Paul Anderson <pha at umich.edu> wrote: > >> Raghavendra, >> >> I've commited my tests case to https://github.com/powool/gluster.git - >> it's grungy, and a work in progress, but I am happy to take change >> suggestions, especially if it will save folks significant time. &g...

+Csaba. On Tue, Mar 6, 2018 at 2:52 AM, Paul Anderson <pha at umich.edu> wrote: > Raghavendra, > > Thanks very much for your reply. > > I fixed our data corruption problem by disabling the volume > performance.write-behind flag as you suggested, and simultaneously > disabling caching in my client side mount command. > Good to k...

...d email them or put them in github - either is fine with me. (they rely on current builds of docker and docker-compose) Thanks again!! Paul On Mon, Mar 5, 2018 at 11:26 AM, Raghavendra Gowdappa <rgowdapp at redhat.com> wrote: > > > On Mon, Mar 5, 2018 at 8:21 PM, Paul Anderson <pha at umich.edu> wrote: >> >> Hi, >> >> tl;dr summary of below: flock() works, but what does it take to make >> sync()/fsync() work in a 3 node GFS cluster? >> >> I am under the impression that POSIX flock, POSIX >> fcntl(F_SETLK/F_GETLK,...), and POS...

I am having a hard time interpreting the phase and coherency plots. x is two timeseries that occur at the same time i.e. a b 1 11.2 12.3 16 11.3 12.4 31 11.4 12.5 46 11.5 12.6 ...etc even though my example is does not show this they are oscillating at more or less the same frequency just shifted b...

...-out.sh &nbsp; #!/bin/sh &nbsp; USER=$1 &nbsp; cat &gt; /tmp/tempfile &nbsp; cat /tmp/tempfile cat &nbsp;/tmp/tempfile This message is in MIME format. --nsmail-7bjyg3nr5o-7bmibqhut9 Content-Type: text/html; charset="UTF-8" Content-Transfer-Encoding: base64 PHA+Jm5ic3A7PC9wPjxwPiZuYnNwOzIxMjEyMTIxPC9wPjxwPiZuYnNwOzwv cD48cD4mbmJzcDs8L3A+PHA+Jm5ic3A7PC9wPjxwPiZuYnNwOzwvcD4tLS0t PGRpdiBpZD0iY3MyY19tYWlsX3NpZ2F0dXJlIj48L2Rpdj48cD48L3A+ --nsmail-7bjyg3nr5o-7bmibqhut9-- But the log appears: &nbsp; Feb 08 19:14:18 lda(q1 at a.com)<71012&gt;<m...

On CentOS5 with the latest updates applied, the logwatch filter for postfix returns way too many lines from the log. I get an "unmatched entries" message and all messages that have gone through the system is listed. Here is an example: 8F930A8092: to=<morten at foo.bar>, orig_to=<morten at localhost>, relay=local, delay=0.19, delays=0.06/0.01/0/0.12, dsn=2.0.0,

On Mon, Mar 5, 2018 at 8:21 PM, Paul Anderson <pha at umich.edu> wrote: > Hi, > > tl;dr summary of below: flock() works, but what does it take to make > sync()/fsync() work in a 3 node GFS cluster? > > I am under the impression that POSIX flock, POSIX > fcntl(F_SETLK/F_GETLK,...), and POSIX read/write/sync/fsync are all &gt...

Hi, tl;dr summary of below: flock() works, but what does it take to make sync()/fsync() work in a 3 node GFS cluster? I am under the impression that POSIX flock, POSIX fcntl(F_SETLK/F_GETLK,...), and POSIX read/write/sync/fsync are all supported in cluster operations, such that in theory, SQLite3 should be able to atomically lock the file (or a subset of page), modify pages, flush the pages to

Hello, I would like extract the Mean Sq of the Residuals how should I do please? thanks. > summary(fm1) Df Sum Sq Mean Sq F value Pr(>F) groupe 20 300.987 15.049 22.853 3.369e-16 *** Residuals 41 27.000 0.659 --- Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

...me way taking into account my velocity distribution when resampling? Any suggestions would be very helpful, thanks. Thank you for your time. Greg Ruchti -- Gregory Ruchti Bloomberg Center for Physics and Astronomy Johns Hopkins University 3400 N. Charles St. Baltimore, MD 21218-1216 gruchti at pha.jhu.edu Tel: (410)516-8520

...> try installing the NVIDIA kernel module again. > > *** Failed Xen sanity check. Bailing out! *** > > make[1]: *** [build-sanity-checks] Erreur 1 > make: *** [module] Erreur 2 > emake failed > ^[[31;01m*^[[0m ERROR: x11-drivers/nvidia-drivers-270.41.06 failed > (compile pha > se): > ^[[31;01m*^[[0m Unable to emake HOSTCC=x86_64-pc-linux-gnu-gcc > CROSS_COMPILE= > x86_64-pc-linux-gnu- LDFLAGS= IGNORE_CC_MISMATCH=yes V=1 > SYSSRC=/usr/src/linux > SYSOUT=/lib/modules/2.6.34-xen-r4/build > HOST_CC=x86_64-pc-linux- > gnu-gcc clea...