Displaying 1 result from an estimated 1 matches for "pgi725".
Did you mean:
pg25
2008 Oct 30
1
Compiling R Packages
...e installing it. I have set the $R_LIBS variable correctly.
The MPI libraries are available through the PGI compiler, but this R instance was compiled with GCC.
The Rmpi package can be compiled and installed with
%R CMD INSTALL Rmpi_0.5-5.tar.gz --configure-args="CC=pgcc --with-mpi=/shared/pgi725/linux86-64/7.2/mpi/mpich"
But when entering R and loading the library, I get
%R
> library(Rmpi)
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared library '/home/<username>/.Rlib/Rmpi/libs/Rmpi.so':
/home/<username>/.Rlib/Rmpi/libs/Rmpi.so: unde...