search for: petre

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2005 Nov 28
2
str and structable error
Hallo I encountered a behaviour which puzzles me (but finally I did get what I wanted). I used structable and strucplot but I wanted to change names of variables in structable object. I tried to subset it, use names but to no avail. So I tried str and expected to get a structure of an object but: > sss<-structable(Titanic) > str(sss) Error in "[.structable"(x, args[[1]],
2018 Feb 13
0
plotting the regression coefficients
Hi scale_colour_gradient(?red?, ?blue?) should do the trick. Actually I found it by Google ggplot colour http://www.cookbook-r.com/Graphs/Colors_(ggplot2)/ http://www.sthda.com/english/wiki/ggplot2-colors-how-to-change-colors-automatically-and-manually#gradient-colors-for-scatter-plots question. So you could find it too and probably far more quickly then myself as I have also other duties. Cheers
2018 Feb 12
2
plotting the regression coefficients
Hi Petr and Richard; Thanks for your responses and supports. I just faced a different problem. I have the following R codes and work well. p <- ggplot(a, aes(x=Phenotypes, y=Metabolites, size=abs(Beta), colour=factor(sign(Beta)))) + theme(axis.text=element_text(size = 5)) p1<-p+geom_point() p2<-p1+theme(panel.grid.major = element_blank(), panel.grid.minor = element_blank(),
2018 Feb 12
3
plotting the regression coefficients
Hi After melt you can change levels of your factor variable. Again with the toy example. > levels(temp$variable) [1] "y1" "y2" "y3" "y4" > levels(temp$variable) <- levels(temp$variable)[c(2,4,1,3)] > levels(temp$variable) [1] "y2" "y4" "y1" "y3" > And you will get graphs with this new levels ordering.
2018 Feb 12
0
plotting the regression coefficients
Petr, there was a thinko in your response. tmp <- data.frame(m=factor(letters[1:4]), n=1:4) tmp tmp$m <- factor(tmp$m, levels=c("c","b","a","d")) ## right tmp[order(tmp$m),] tmp <- data.frame(m=factor(letters[1:4]), n=1:4) levels(tmp$m) <- c("c","b","a","d") ## wrong tmp[order(tmp$m),] changing levels
2008 Jan 10
6
4 dimensional graphics
Dear all I want to display 4 dimensional space by some suitable way. I searched CRAN and found miscellaneous 3 dim graphics packages which I maybe can modify but anyway I am open to any hint how to efficiently display data like: longitude, latitude, height, value Thank you Petr Pikal petr.pikal at precheza.cz
2020 Oct 23
2
How to shade area between lines in ggplot2
Thank you, but this split the area into two and distorts the shape of the plot. (compared to ``` p + geom_abline(slope = slope_1, intercept = intercept_1 - 1/w[2], linetype = "dashed", col = "royalblue") + geom_abline(slope = slope_1, intercept = intercept_1 + 1/w[2], linetype = "dashed", col = "royalblue") ``` Why there
2003 Jul 16
1
bwplot does something weird with Hmisc library attached
Dear all I would like to ask you about possible bug in using bwplot (from lattice) together with Hmisc library attached. I found it in my actual data, but here is a toy example. It appears only when some levels are missing. library(lattice) library(Hmisc) # preparing data x1<-rnorm(10,5,1) x2<-rnorm(10,5,5) x3<-rnorm(10,1,1) x4<-rnorm(10,1,5) x<-c(x1,x2,x3,x4) x<-c(x,x+5)
2007 Jun 27
1
make check for 2.5.1 RC fails on mbcsToSbcs in graphics
configure and make run OK, but make check failed for R version 2.5.1 RC (2007-06-26 r42068) on graphics with error: > ## The following two examples use latin1 characters: these may not > ## appear correctly (or be omitted entirely). > plot(1:10, 1:10, main = "text(...) examples\n~~~~~~~~~~~~~~", + sub = "R is GNU ?, but not ? ...") Error in title(...) :
2020 Oct 26
0
How to shade area between lines in ggplot2
Hi Put fill outside aes p+geom_ribbon(aes(ymin = slope_1*x + intercept_1 - 1/w[2], ymax = slope_1*x + intercept_1 + 1/w[2]), fill = "blue", alpha=0.1) The "hole" is because you have two levels of data (red and blue). To get rid of this you should put new data in ribbon call. Something like newdat <- trainset newdat$z <- factor(0) p+geom_ribbon(data=newdat, aes(ymin =
2017 Oct 13
2
How to define proper breaks in RFM analysis
> On Oct 13, 2017, at 2:51 AM, PIKAL Petr <petr.pikal at precheza.cz> wrote: > > Hi > > You expect us to solve your problem but you ignore advice already recieved. > > Your data are unreadable, use dput(yourdata) instead. see ?dput > >> test<-read.table("clipboard", heade=T) > Error in scan(file = file, what = what, sep = sep, quote = quote,
2016 Jul 14
2
Host not reachable over UDP
You might want to try with https://github.com/gsliepen/tinc/pull/120 - that said, this bug probably doesn't explain everything because tinc is supposed to log a message from setup_vpn_in_socket() anyway, but there's no such message in your log. In addition, I really don't see any way the "Received UDP packet from unknown source" message could be logged if the UDP socket
2005 Feb 09
2
[Fwd: Re: Fw: Contour plot]
Petr, It works perfectly! But I still have a question; I have fit the following data; x,y,z 1,10,11 2,11,15 3,12,21 4,13,29 5,14,39 6,15,51 7,16,65 8,17,81 9,18,99 10,19,119 >dat.lm <- lm(z~I(x^2)+y, data=dat) >dat.lm Call: lm(formula = z ~ I(x^2) + y, data = dat) Coefficients: (Intercept) I(x^2) y 1.841e-14 1.000e+00 1.000e+00 How do I create the
2006 Sep 18
0
Question on apply() with more information...
>From: =?ISO646-US?Q?Gunther_H=3Fning?= <gunther.hoening at ukmainz.de> >Date: 2006/09/18 Mon AM 06:26:25 CDT >To: 'Petr Pikal' <petr.pikal at precheza.cz> >Cc: r-help at stat.math.ethz.ch >Subject: Re: [R] Question on apply() with more information... I think you want something like below but it probably needs some fixing up because i don't recall the syntax
2007 Jan 05
4
Fast Removing Duplicates from Every Column
Hi, I'm looking for some lines of code that does the following: I have a dataframe with 160 Columns and a number of rows (max 30): Col1 Col2 Col3 ... Col 159 Col 160 Row 1 0 0 LD ... 0 VD Row 2 HD 0 0 0 MD Row 3 0 HD HD 0 LD Row 4 LD HD HD 0 LD ... ... LastRow HD HD LD 0 MD Now I want a dataframe that looks like this. As you see
2004 Jun 09
5
"attach" in R corr. to Spus one
Hi, I am a newbie to R, just trying to switch from Splus. I am wondering to know if there is any such command in R as "attach" in Splus which can be used to attach the full directory. Also, any idea/referrence about, how to load c functions in R would be highly appreciated. Thanks, Utsav
2005 Nov 02
3
encoding tool
hallo I want to reencode mp3's to a 128 kbps rate, in order to avoid "on-the-fly encoding" feature what program I need ? is switching format from mp3 to ogg a good option ? thanks, petre -- Petre Bandac Network Scientist - petre at kgb.ro
2003 May 20
3
plot POSIX class and identify
Hallo all just a small question I did not find an answer in help pages. Is it possible to use identify() after plotting with plot.POSIX to label points and/or to find out some points? Thanks a lot. Best regards Petr Pikal petr.pikal at precheza.cz p.pik at volny.cz
2006 Apr 05
1
(Fwd) Re: Reading xyz data from a file and plotting a cont
BTW. I checked help page of contour and maybe it could mention a note about akima package or interp function. Petr ------- Forwarded message follows ------- From: Petr Pikal <petr.pikal at precheza.cz> To: "Abhinav Verma" <abhinav1205 at gmail.com>, r-help at stat.math.ethz.ch Subject: Re: [R] Reading xyz data from a file and plotting a
2018 Feb 12
0
plotting the regression coefficients
Hi Petr; Thanks so much. This is great! Although last Sunday, alternatively, I have solved the problem using the following statement at the very end of the program. * ggsave('circle.pdf', p4, height = 70, width = 8, device=pdf, limitsize = F, dpi=300).* This works very well too. Asa my categorical variables are in my Y axis, my R program reorders the names on Y-axis. However, I would