search for: peaklist

Displaying 3 results from an estimated 3 matches for "peaklist".

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2011 Sep 21
4
chippeakanno package: "getAllPeakSequence" problem
Hi all, I am using the package ChIPpeakAnno, and I have a problem with the function getAllPeakSequence. This is related to object oriented programming I think, I have the following message: > peaksWithSequences <- getAllPeakSequence(peakList, upstream = 100, > downstream = 100, genome = Hsapiens) Error in validObject(.Object) : invalid class "GRanges" object: superclass "Sequence" not defined in the environment of the object's class Is the error coming from my configuration or from the code? I do not kno...
2007 Sep 24
1
PicTeX output: how to suppress escaping of $ signs and braces?
Dear All, I'm trying to draw a TeX histogram with the following pair of commands, pictex(file = "realhisto.tex") hist(Peaklist$V3,xlab="Height $z/\\ut{mm}$",ylab="Probability density $\\phi{}(z-z_0)/(1/\\ut{mm})$") However, in the resulting file realhisto.tex, I get, for example \put {Height \$z/\ut\{mm\}\$} [lB] <0.00pt,0.00pt> at 136.13 9.17 when what I'd like is \put {Height $z/\ut{mm}...
2010 Jun 22
0
Working cludge [Re: SSOAP fails with .types[[1]] : subscript out of bounds]
...</wsdl:binding> <wsdl:service name="MassBank_InstrumentsService"> <wsdl:documentation>Authority: ipb-halle.de - retrieves available mass spectrometry instrument types used in MassBank can be used to filter output when querying MassBank by peaklist and instrument types</wsdl:documentation> <!-- service description goes here --> <wsdl:port name="MassBank_InstrumentsPort" binding="tns:MassBank_InstrumentsBinding"> <wsdlsoap:address location="http://msbi.ipb-halle.de/axis/...