Displaying 6 results from an estimated 6 matches for "pcre_free_study".
2017 Apr 20
1
Intel MKL compiling issue
...o `lzma_raw_decoder at XZ_5.0'
../../lib/libR.so: undefined reference to `lzma_lzma_preset at XZ_5.0'
../../lib/libR.so: undefined reference to `lzma_version_string at XZ_5.0'
../../lib/libR.so: undefined reference to `pcre_jit_stack_alloc'
../../lib/libR.so: undefined reference to `pcre_free_study'
../../lib/libR.so: undefined reference to `lzma_crc64 at XZ_5.0'
../../lib/libR.so: undefined reference to `pcre_assign_jit_stack'
../../lib/libR.so: undefined reference to `lzma_end at XZ_5.0'
../../lib/libR.so: undefined reference to `lzma_raw_encoder at XZ_5.0'
../../lib/lib...
2015 Nov 28
0
[patch] Use JIT for PCRE pattern matching
...pcre_study(re_pcre, 0, &errorptr);
+ re_pe = pcre_study(re_pcre, PCRE_STUDY_JIT_COMPILE, &errorptr);
if (errorptr)
warning(_("PCRE pattern study error\n\t'%s'\n"), errorptr);
@@ -482,7 +486,11 @@
}
vmaxset(vmax2);
}
+#ifdef PCRE_CONFIG_JIT
+ pcre_free_study(re_pe);
+#else
pcre_free(re_pe);
+#endif
pcre_free(re_pcre);
} else if (!useBytes && use_UTF8) { /* ERE in wchar_t */
regex_t reg;
@@ -867,12 +875,12 @@
warning(_("PCRE pattern compilation error\n\t'%s'\n\tat '%s'\n"),
errorptr, spat+erro...
2017 Apr 20
2
Intel MKL compiling issue
Dear R-developers,
I would appreciate any insights over compiling R 3.4 with Intel MKL -- I have been successful until R 3.3.3 but now it stops complaining about pcre though it worked without Intel MKL as follows,
./configure LDFLAGS=-L/genetics/data/software/lib CFLAGS=-fPIC -I/genetics/data/software/include --enable-R-shlib
I have used,
export MKL_NUM_THREADS=15
export
2017 Aug 23
2
No rule to make target all.R, needed by compiler.rdb building R 3.4.1 from source, Scientific Linux release 6.9 (Carbon)
...L/usr/local/lib/gcc/lapack/3.3.0 -L/usr/local/packages6/libs/gcc/4.4.7/bzip2/1.0.6/lib/ -o R.bin Rmain.o -lR -lRblas
../../lib/libR.so: undefined reference to `pcre_assign_jit_stack'
../../lib/libR.so: undefined reference to `pcre_jit_stack_alloc'
../../lib/libR.so: undefined reference to `pcre_free_study'
collect2: error: ld returned 1 exit status
make[3]: *** [R.bin] Error 1
make[3]: Leaving directory `/data/mbp15ja/R-3.4.1/R-3.4.1/src/main'
make[2]: *** [R] Error 2
make[2]: Leaving directory `/data/mbp15ja/R-3.4.1/R-3.4.1/src/main'
make[1]: *** [R] Error 1
make[1]: Leaving directory `...
2017 Aug 23
1
No rule to make target all.R, needed by compiler.rdb building R 3.4.1 from source, Scientific Linux release 6.9 (Carbon)
...source, Scientific Linux release 6.9 (Carbon)
On 08/23/2017 03:58 PM, Jaime Alvarez Benayas wrote:
> ../../lib/libR.so: undefined reference to `pcre_assign_jit_stack'
> ../../lib/libR.so: undefined reference to `pcre_jit_stack_alloc'
> ../../lib/libR.so: undefined reference to `pcre_free_study'
This is the error. Your PCRE is being built with SUPPORT_JIT undefined.
You should see some warning during the configure phase for PCRE that says "JIT support requires pthreads" or something like that. You should get that from glibc-devel.
~tom
2017 Aug 18
4
No rule to make target all.R, needed by compiler.rdb building R 3.4.1 from source, Scientific Linux release 6.9 (Carbon)
Hello,
I am trying to build R from source on Scientific Linux release 6.9
(Carbon), Linux version 2.6.32-696.3.2.el6.x86_64 (Red Hat 4.4.7-18).
I load the needed modules and run:
*./configure --prefix $install_dir --with-blas --with-lapack
--enable-R-shlib 2>&1 | tee config-R-$version.log*
The "configure" command seems to run ok:
*R is now configured for