search for: pcmfit

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2019 Apr 05
0
new R packages for phylogenetic compartive methods
...generate.model.setups()), d) the user can set entries of the OU model's parameters to desired values (e.g. 0) and this will be fixed through the whole estimation, e) a number of control parameters to be passed to the estimation procedure and optim() are available for the user to manipulate 2) PCMFit: the goal of PCMFit is to provide a generic tool for inference and selection of phylogenetic comparative models (PCMs). Currently, the package implements Gaussian and mixed Gaussian phylogenetic models (MGPM) over all tree types (including non-ultrametric and polytomic trees). The package supports...
2019 Apr 05
0
new R packages for phylogenetic compartive methods
...generate.model.setups()), d) the user can set entries of the OU model's parameters to desired values (e.g. 0) and this will be fixed through the whole estimation, e) a number of control parameters to be passed to the estimation procedure and optim() are available for the user to manipulate 2) PCMFit: the goal of PCMFit is to provide a generic tool for inference and selection of phylogenetic comparative models (PCMs). Currently, the package implements Gaussian and mixed Gaussian phylogenetic models (MGPM) over all tree types (including non-ultrametric and polytomic trees). The package supports...