Displaying 20 results from an estimated 74 matches for "parentenv".
2012 May 15
1
KEGGSOAP installation error
...NamespaceInfo),
as.character(encoding), as.logical(useDotNames), xinclude, error,
addFinalizer, PACKAGE = "XML")
2: xmlParse(url)
3: parseSchemaDoc(fileName)
4: processWSDL("http://soap.genome.jp/KEGG.wsdl")
5: fun(libname, pkgname)
6: doTryCatch(return(expr), name, parentenv, handler)
7: tryCatchOne(expr, names, parentenv, handlers[[1L]])
8: tryCatchList(expr, classes, parentenv, handlers)
9: tryCatch(fun(libname, pkgname), error = identity)
10: runHook(".onLoad", env, package.lib, package)
11: loadNamespace(package, c(which.lib.loc, lib.loc))
12: doTryCat...
2018 Jul 05
2
Segfault on ubuntu 18.04
...hub("goranbrostrom/eha", build_vignettes = TRUE)
*** caught segfault ***
address 0x68456, cause 'memory not mapped'
Traceback:
1: dyn.load(file, DLLpath = DLLpath, ...)
2: library.dynam(lib, package, package.lib)
3: loadNamespace(name)
4: doTryCatch(return(expr), name, parentenv, handler)
5: tryCatchOne(expr, names, parentenv, handlers[[1L]])
6: tryCatchList(expr, classes, parentenv, handlers)
7: tryCatch(loadNamespace(name), error = function(e) stop(e))
8: getNamespace(ns)
9: asNamespace(ns)
10: getExportedValue(pkg, name)
11: curl::new_handle
12: handle(name)
1...
2013 Jun 07
1
cannot load pbdMPI package after compilation
...39; --no-save --slave 2>&1 <
/tmp/RtmpGkncGK/file1e541c57190
ERROR: loading failed
*** caught segfault ***
address (nil), cause 'unknown'
Traceback:
1: .Call("spmd_initialize", PACKAGE = "pbdMPI")
2: fun(libname, pkgname)
3: doTryCatch(return(expr), name, parentenv, handler)
4: tryCatchOne(expr, names, parentenv, handlers[[1L]])
5: tryCatchList(expr, classes, parentenv, handlers)
6: tryCatch(fun(libname, pkgname), error = identity)
7: runHook(".onLoad", env, package.lib, package)
8: loadNamespace(package, c(which.lib.loc, lib.loc))
9: doTryCat...
2009 Jan 07
1
Compiling R for Solaris 10 Intel
...here was no resolution. Have other people experienced this at all?
Tia!
-y
> library(foreign)
*** caught segfault ***
address fe899a60, cause 'invalid permissions'
Traceback:
1: .C("spss_init", PACKAGE = "foreign")
2: fun(...)
3: doTryCatch(return(expr), name, parentenv, handler)
4: tryCatchOne(expr, names, parentenv, handlers[[1]])
5: tryCatchList(expr, classes, parentenv, handlers)
6: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1]], quote(doTryCatch))) call <- sys.call(...
2007 Dec 10
1
Building R on Sun Solaris 10 (SPARC) using Sun Studio 12
...ing to load "foreign":
> > library(foreign)
>
> *** caught segfault ***
> address fbb1dc40, cause 'invalid permissions'
>
> Traceback:
> 1: .C("spss_init", PACKAGE = "foreign")
> 2: fun(...)
> 3: doTryCatch(return(expr), name, parentenv, handler)
> 4: tryCatchOne(expr, names, parentenv, handlers[[1]])
> 5: tryCatchList(expr, classes, parentenv, handlers)
> 6: tryCatch(expr, error = function(e) { call <-
> conditionCall(e) if (!is.null(call)) { if
> (identical(call[[1]], quote(doTryCatch)))...
2018 Sep 19
5
segfault issue with parallel::mclapply and download.file() on Mac OS X
...caught segfault ***
address 0x11575ba3a, cause 'memory not mapped'
*** caught segfault ***
address 0x11575ba3a, cause 'memory not mapped'
Traceback:
1: download.file(paste0(url_base, s), s)
2: FUN(X[[i]], ...)
3: lapply(X = S, FUN = FUN, ...)
4: doTryCatch(return(expr), name, parentenv, handler)
5: tryCatchOne(expr, names, parentenv, handlers[[1L]])
6: tryCatchList(expr, classes, parentenv, handlers)
7: tryCatch(expr, error = function(e) { call <- conditionCall(e) if
(!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch)))
call <- sys.call(-4...
2018 Jul 05
0
Segfault on ubuntu 18.04
...caught segfault ***
>> address 0x68456, cause 'memory not mapped'
>>
>> Traceback:
>> 1: dyn.load(file, DLLpath = DLLpath, ...)
>> 2: library.dynam(lib, package, package.lib)
>> 3: loadNamespace(name)
>> 4: doTryCatch(return(expr), name, parentenv, handler)
>> 5: tryCatchOne(expr, names, parentenv, handlers[[1L]])
>> 6: tryCatchList(expr, classes, parentenv, handlers)
>> 7: tryCatch(loadNamespace(name), error = function(e) stop(e))
>> 8: getNamespace(ns)
>> 9: asNamespace(ns)
>> 10: getExpor...
2018 Jul 06
0
Segfault on ubuntu 18.04
...ld_vignettes = TRUE)
>
> *** caught segfault ***
> address 0x68456, cause 'memory not mapped'
>
> Traceback:
> 1: dyn.load(file, DLLpath = DLLpath, ...)
> 2: library.dynam(lib, package, package.lib)
> 3: loadNamespace(name)
> 4: doTryCatch(return(expr), name, parentenv, handler)
> 5: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> 6: tryCatchList(expr, classes, parentenv, handlers)
> 7: tryCatch(loadNamespace(name), error = function(e) stop(e))
> 8: getNamespace(ns)
> 9: asNamespace(ns)
> 10: getExportedValue(pkg, name)
> 11: curl:...
2012 Feb 23
1
segfault when using data.table package in conjunction with foreach
...bc.chr22.q.20.file", sep =
""), num, nr)
5: system.time({ computeAllPairSums(paste(GERMLINE,
"bc.chr22.q.20.file", sep = ""), num, nr)})
6: eval(expr, envir, enclos)
7: eval(c.expr, envir = args, enclos = envir)
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(eval(c.expr, envir = args, enclos = envir), error = function(e) e)
12: FUN(X[[1L]], ...)
13: lapply(S, FUN, ...)
14: doTryCatch(return(expr), name, parentenv, handler)...
2011 Jan 27
0
Problems installing gputools
...e can be loaded
*** caught segfault ***
address 0x8, cause 'memory not mapped'
Traceback:
1: dyn.load(file, DLLpath = DLLpath, ...)
2: library.dynam(lib, package, package.lib)
3: loadNamespace(package, c(which.lib.loc, lib.loc), keep.source =
keep.source)
4: doTryCatch(return(expr), name, parentenv, handler)
5: tryCatchOne(expr, names, parentenv, handlers[[1L]])
6: tryCatchList(expr, classes, parentenv, handlers)
7: tryCatch(expr, error = function(e) { call <- conditionCall(e) if
(!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <-
sys.call(-4L) dcall <- deparse(c...
2008 Mar 12
1
gracefully handing a library load error
...;m sshed in), attempting "library(cairoDevice)" causes:
*** caught segfault ***
address 0x8, cause 'memory not mapped'
Traceback:
1: .C("R_gtk_setEventHandler", PACKAGE = "cairoDevice")
2: firstlib(which.lib.loc, package)
3: doTryCatch(return(expr), name, parentenv, handler)
4: tryCatchOne(expr, names, parentenv, handlers[[1]])
5: tryCatchList(expr, classes, parentenv, handlers)
6: tryCatch(expr, error = function(e) { call <- conditionCall(e) if
(!is.null(call)) { if (identical(call[[1]],
quote(doTryCatch))) call <- sys.call(...
2012 Feb 06
1
Segfault on ".C" registration via R_CMethodDef according to 'Writing R Extensions'.
...e loaded
*** arch - i386
*** caught bus error ***
address 0xe, cause 'non-existent physical address'
Traceback:
1: dyn.load(file, DLLpath = DLLpath, ...)
2: library.dynam(lib, package, package.lib)
3: loadNamespace(package, c(which.lib.loc, lib.loc))
4: doTryCatch(return(expr), name, parentenv, handler)
5: tryCatchOne(expr, names, parentenv, handlers[[1L]])
6: tryCatchList(expr, classes, parentenv, handlers)
7: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.cal...
2018 Nov 23
1
[tryExcept] New try Function
...or occurs. You could do it with <<-,
but I prefer to reduce it's usage unless completely necessary.
I guess that the attachment was missed in the moderation. Here it is the
function:
tryExcept <- function (expr,
except = {})
{
doTryExcept <- function(expr, parentenv) {
.Internal(.addCondHands("error", list(NULL), parentenv,
environment(), FALSE))
expr
}
parentenv <- parent.frame()
doTryExcept(return(expr), parentenv)
invisible(except)
}
As you can see, the tryExcept function uses a simplified version of...
2010 Nov 16
2
Debugging segfault in foreach
...0x30, cause 'memory not mapped'
Traceback:
1: format(x[[i]], ..., justify = justify)
2: format.data.frame(x, digits = digits, na.encode = FALSE)
3: as.matrix(format.data.frame(x, digits = digits, na.encode = FALSE))
4: print.data.frame(r)
5: print(r)
6: doTryCatch(return(expr), name, parentenv, handler)
7: tryCatchOne(expr, names, parentenv, handlers[[1L]])
8: tryCatchList(expr, classes, parentenv, handlers)
9: tryCatch({ repeat { args <- nextElem(it) if
(obj$verbose) { cat(sprintf("evaluation # %d:\n", i))
print(args) } for...
2018 Oct 04
0
segfault issue with parallel::mclapply and download.file() on Mac OS X
...#39;memory not mapped'
>
> *** caught segfault ***
> address 0x11575ba3a, cause 'memory not mapped'
>
> Traceback:
> 1: download.file(paste0(url_base, s), s)
> 2: FUN(X[[i]], ...)
> 3: lapply(X = S, FUN = FUN, ...)
> 4: doTryCatch(return(expr), name, parentenv, handler)
> 5: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> 6: tryCatchList(expr, classes, parentenv, handlers)
> 7: tryCatch(expr, error = function(e) { call <- conditionCall(e) if
> (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch)))
>...
2010 Feb 08
2
Error on start R in server
...hen 82
Traceback:
1: .getClassFromCache(Class, where)
2: getClassDef(cl)
3: methods:::is(genfun, "genericFunction")
4: registerS3methods(nsInfo$S3methods, package, env)
5: loadNamespace(package, c(which.lib.loc, lib.loc), keep.source =
keep.source)
6: doTryCatch(return(expr), name, parentenv, handler)
7: tryCatchOne(expr, names, parentenv, handlers[[1L]])
8: tryCatchList(expr, classes, parentenv, handlers)
9: tryCatch(expr, error = function(e) { call <- conditionCall(e) if
(!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch)))
call <- sys.cal...
2009 Dec 30
1
seg-fault... but on what
...t;integer")
4: mysqlConnectionInfo(dbObj, ...)
5: dbGetInfo(conn, "rsId")
6: dbGetInfo(conn, "rsId")
7: dbListResults(con)
8: dbListResults(con)
9: mysqlQuickSQL(conn, statement, ...)
10: dbGetQuery(con, sql)
11: dbGetQuery(con, sql)
12: doTryCatch(return(expr), name, parentenv, handler)
13: tryCatchOne(expr, names, parentenv, handlers[[1L]])
14: tryCatchList(expr, classes, parentenv, handlers)
15: tryCatch(expr, error = function(e) { call <- conditionCall(e) if
(!is.null(call)) { if (identical(call[[1L]],
quote(doTryCatch))) call <- sys.cal...
2017 Sep 21
2
rcorr error in R stat
...> I am relatively new to R and I don't understand this "read.csv
> returns data.frames". Sorry.
>
> This however did not work. "unlist(x) and unlist(y)". I got a series
> of 43 warnings:
>
> Warning messages:
> 1: In doTryCatch(return(expr), name, parentenv, handler) :
> ? "method" is not a graphical parameter
> 2: In doTryCatch(return(expr), name, parentenv, handler) :
> ? "method" is not a graphical parameter
> .
> .
> .
> .
> .
>
> ? "method" is not a graphical parameter
> 42: In doTryC...
2018 Sep 20
0
segfault issue with parallel::mclapply and download.file() on Mac OS X
...use 'memory not mapped'
>
> *** caught segfault ***
> address 0x11575ba3a, cause 'memory not mapped'
>
> Traceback:
> 1: download.file(paste0(url_base, s), s)
> 2: FUN(X[[i]], ...)
> 3: lapply(X = S, FUN = FUN, ...)
> 4: doTryCatch(return(expr), name, parentenv, handler)
> 5: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> 6: tryCatchList(expr, classes, parentenv, handlers)
> 7: tryCatch(expr, error = function(e) { call <- conditionCall(e) if
> (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch)))
>...
2010 Oct 10
1
segfault caused by `icfit` in `interval` package
...tol)
2: computeMLE(R, B, max.inner = max.inner, max.outer = max.outer, tol =
tol)
3: initcomputeMLE(<<<<< arguments passed to initcomputeMLE>>>>>)
4: do.call(initfit, args = list(L = L, R = R, Lin = Lin, Rin = Rin, A =
A))
5: doTryCatch(return(expr), name, parentenv, handler)
6: tryCatchOne(expr, names, parentenv, handlers[[1L]])
7: tryCatchList(expr, classes, parentenv, handlers)
8: tryCatch(expr, error = function(e) { call <- conditionCall(e) if
(!is.null(call)) { if (identical(call[[1L]],
quote(doTryCatch))) call <- sys.cal...