Displaying 1 result from an estimated 1 matches for "pantro2".
2008 Oct 06
2
Problem with Grep Under Loop
Dear all,
I have no problem with this individual grep command:
> datk <- grep("XM_528056", source$V1)
> dat2 <- source[datk,]
> print(dat2)
V1 V2 V3 V4 V5 V6 V7
35995 XM_528056 panTro2 chr8 + 1775569 1896107 Chimpanzee
BUT, when I run them under the loop it gives this error:
> hm_acc <- c("XM_528056","AB002296")
> for (i in 1:length(hm_acc)){
+
+ hm_acc_id <- as.character(hm_acc[i])
+ print(hm_acc_id)
+
+ hm_allk <- grep(hm_acc_id,...