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pachakege
2010 Mar 30
1
Multivariate hypergeometric distribution version of phyper()
...gene lists) i'm unable to perform
the calculations- the numbers hit infinity before getting an answer.
Searching cran archives for "Multivariate hypergeometric" show this term
in the vignettes of package's ?combinat? and ?forward?. But i'm unable
to make sense of the these pachakege functions in the context of my
aforementioned apllication.
Can some one suggest a function, script or method to achieve my goal of
estimating the likelyhood of overlap between 3 lists of genes, ideally
using the multivariate hypergeometric, or anything else for that matter?
cheers in advance,...