Displaying 1 result from an estimated 1 matches for "outpedigreefile".
2009 Jun 18
1
Calling library functions from outside R
...to make life easier.
(code available at inside "birdsuite executables" at http://www.broad.mit.edu/science/programs/medical-and-population-genetics/birdsuite/birdsuite-downloads-0)
Example:
---
library (broadgap.utils)
pedigreeFile<-commandLineArg("pedigreeFile", verbose=T)
outPedigreeFile<-commandLineArg("outPedigreeFile", verbose=T)
relabelPedigree(pedigreeFile, outPedigreeFile)
---
called by:
R CMD BATCH --pedigreeFile="foo" --outPedigreeFile="bar"
example_client.R
What I'd like to do is find a way to achieve the above, but without
writin...