Displaying 2 results from an estimated 2 matches for "otu00218".
2013 Feb 12
3
subsetting data file by intoducing a second file
...es that I need to subset. However I cannot manage to subset the main file. ANy idea?
bg <- read.table (file.choose(), header=T, row.names)
bg
Otu00022 Otu00029 Otu00039 Otu00042 Otu00101 Otu00105 Otu00125 Otu00131 Otu00137 Otu00155 Otu00158 Otu00172 Otu00181 Otu00185 Otu00190 Otu00209 Otu00218
Gi20Jun11 0.001217 0 0.001217 0 0.000000 0 0 0 0.001217 0 0 0 0 0 0.001217 0 0.001217
Gi40Jun11 0.000000 0 0.000000 0 0.000000 0 0 0 0.000000 0 0 0 0...
2013 Feb 13
5
spearman correlation and p-value as a matrix
...culate the p-value Matrices dont have the same size and I tried such a script.
> bg <- read.table (file.choose(), header=T, row.names)
> bg
> Otu00022 Otu00029 Otu00039 Otu00042 Otu00101 Otu00105 Otu00125 Otu00131 Otu00137 Otu00155 Otu00158 Otu00172 Otu00181 Otu00185 Otu00190 Otu00209 Otu00218
> Gi20Jun11 0.001217 0 0.001217 0 0.000000 0 0 0 0.001217 0 0 0 0 0 0.001217 0 0.001217
> Gi40Jun11 0.000000 0 0.000000 0 0.000000 0 0 0 0.000000 0 0 0 0 0 0.000000 0 0.000000
> Gi425Jun11 0.000000 0 0.000000 0 0.000000 0 0 0 0.000000 0 0 0 0 0 0.000000 0 0.000000
> Gi45Jun11 0.0000...