search for: orientlib

Hi All user, I have been using R-2.5.1. dose orientlib support this version? I would like to try. it. I have been wondering how to install the library. With regards, abu _________________________________________________________________ Celeb spotting ? Play CelebMashup and win cool prizes

In 1.7.1 and today's r-patched in Windows, starting a continuation line with a tab in a DESCRIPTION file causes the continuation to be lost. For example, I have this file: Package: orientlib Title: Support for orientation data Version: 0.2 Author: Duncan Murdoch Description: Representations, conversions and display of orientation SO(3) data. See the orientlib help topic for details. Maintainer: Duncan Murdoch <dmurdoch@pair.com> License: GPL The Description line is supposed to...

I'm trying to add a namespace to my orientlib package. It makes use of S4 methods. A few questions, and a couple of suggestions: 1. Is there a way to put version dependency into the NAMESPACE file? I need to import something from stats in r-devel, but (of course) I get an error when using the same import directive in r-patched and earlier...

R-devel, I'm interested in looking at some examples of existing R packages that rely heavily on S4 classes to get a feel for varying styles and package organization techniques. Could you recommend any packages that might serve as a good starting point? Thanks in advance, Jeff

R-devel, I'm interested in looking at some examples of existing R packages that rely heavily on S4 classes to get a feel for varying styles and package organization techniques. Could you recommend any packages that might serve as a good starting point? Thanks in advance, Jeff

I'd like to give a copy of an R package to someone using S-PLUS. It doesn't just run as-is, it'll need changes. Has anyone written any general guidelines on ways to port in that direction? Duncan Murdoch

Hi Dirk, Thanks for the solution. Now I know the work-arounds, but still don't quite get it. Why does R_DEFAULT_PACKAGES has anything to do with library(methods)? If library(h5) works, it should just work, not depend on an environment variable. Rscript is not consistent with R, that's my confusion. Steve 2017-12-26 20:46 GMT+08:00 Dirk Eddelbuettel <edd at debian.org>: >

...(112)). The "gmp" package imports methods, and it works in Rscript. What doesn't work is to expect library(h5) or library(gmp) to cause methods functions like show() to be available to the user. There is a way to do that, but it is discouraged nowadays. My ancient package "orientlib" depends on methods, and that forces methods to be attached so show() works in Rscript. ("Depends" is used in the DESCRIPTION file sense.) h5 doesn't "depend" on methods, it "imports" methods. > > | Rscript is not consistent with R, that's my...

I'm in the process of converting some S3 methods to S4 methods. I have this function : setGeneric("enrichmentCalc", function(rs, organism, seqLen, ...){standardGeneric("enrichmentCalc")}) setMethod("enrichmentCalc", c("GenomeDataList", "BSgenome"), function(rs, organism, seqLen, ...) { ... ... ... })

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