Displaying 2 results from an estimated 2 matches for "optimal1".
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2013 Sep 15
0
building R, rJava, & Rserve on Centos without admin privileges (or support)
...the setup...
$ R_SHELL=/bin/sh
$ R_HOME=~/R-devel
$ cd $R_HOME; ./configure; make
returns
...
begin installing recommended package MASS
Error in untar2(tarfile, files, list, exdir, restore_times) :
incomplete block on file
make[2]: *** [MASS.ts] Error 1
make[2]: Leaving directory `/home1/optimal1/R-devel/src/library/Recommended'
make[1]: *** [recommended-packages] Error 2
make[1]: Leaving directory `/home1/optimal1/R-devel/src/library/Recommended'
make: *** [stamp-recommended] Error 2
$ cd ../R-packages; R CMD INSTALL MASS
succeeds, though
$ make
still fails on MASS, a...
2013 Sep 16
0
JDK not registered
...'
header prep.: ''
cpp flags : ''
java libs : ''
configure: error: Java Development Kit (JDK) is missing or not registered.
Of course that may be because I have not yet successfully completed a make
of R
if I run R CMD javareconf -e
I get:
Java interpreter : /home1/optimal1/jdk1.7.0_40/jre/bin/java (why
not the one in the jdk/bin?)
Error: Could not create the Java Virtual Machine.
Error: A fatal exception has occurred. Program will exit.
Error occurred during initialization of VM
Could not reserve enough space for object heap
*** Java interpreter doesn'...