search for: onmikula

Dear R-helpers, I have a number of point configurations representing skull shapes, but some of them contain superfluous points. I want to write a loop in which each configuration is plotted and I am asked to write the numbers of points that are superfluous. However, I don't know how to introduce this interactive element. Would you give me an advice? Best regards Ond?ej Mikula -- Ond?ej

Dear R-helpers, could anybody explain me briefly what is the difference between eigenvectors returned by 'eigen' and 'svd' functions and how they are related? Thanks in advance Ondrej Mikula

Dear R-helpers, I need to fit natural cubic spline with specified number of knots. I expected 'splines' package will be helpful, but I am confused by its help. Is more detailed documentation available for it or could you recommend another R function? Best regards Ondrej Mikula

Hello, I look for a simple command computing multivariate group means and returning an object of class "matrix" rather than "list". Does any such function exist in standard packages? I'm beginning with R, so I'm sorry if the solution is trivial. Ondra Mikula

Dear R-helpers, I need two simple functions, I guess they exist in R, but I am unable to find them. The first function should cyclically rotate elements in a vector. ("guyrot" in the package "wavethresh" should do it, but there's some problem with its loading) The second function should rotate points in 2D by a given angle (about the defined point). Thanks for any advice

Dear r-helpers, I used lsfit to estimate regression coefficients from the matrices of predictors and predicted values (i.e multivariate multiple regression model). I wish, however, to compute rank-one matrices of predictor values from the predicted ones. How to do it in R? Could you suggest me appropriate function or formula in matrix notation? Best wishes Ondrej Mikula (Institue of Animal

Dear R-helpers, I need to quantify dissimilarity of two minimum spanning trees, specifically dissimilarity of their topologies. (They connect the same objects but they are calculated from different sets of variables.) Are you aware of any R-function doing this? Best regards Ondrej Mikula

Dear r-helpers, I have a query regarding use of contrasts in MANOVA. summary(manova(model)) gives me only result of test for overall difference. Would you be so kind and give me a hint how to get the same test statistics (e.g.Pillai's) and P values for the predefined contrasts? Best regards Ondrej Mikula -- Institute of Animal Physiology and Genetics Academy of Sciences of the Czech

Dear list, is there a way how to add information to internal nodes (branching points) in dendrogram created via plot.agnes function (package cluster)? I wish to place colored circles on the nodes, but I don't know how to proceed... I'll be grateful for any suggestion Ond?ej -- Ond?ej Mikula Institute of Animal Physiology and Genetics Academy of Sciences of the Czech Republic Veveri 97,

Dear list, following the vignette of the package 'spacemmakeR' I have built a gabriel graph of ten randomly placed points: library(spdep) set.seed(3) xyir<-matrix(runif(20),10,2) nbgab<-graph2nb(gabrielneigh(xyir), sym=TRUE) plot(nbgab,xyir,points=FALSE) points(xyir,pch=20,cex=2,col=c(2,4,4,4,2,2,4,2,4,4)) title(main="Gabriel Graph") Now, I need to determine for any

Dear r-helpers, I have a graph created using the library 'spatgraphs'. library(spatstat) library(spatgraphs) xy <- rbind(c(28.39, -16.27), c(30.62, -20.13), c(32.25, -28.7), c(22.43, -27.22), c(27.5, -21.17), c(31.22, -24.52), c(17.93, -26.92), c(18.72, -17.95), c(24.15, -17.82), c(29.23, -22.85)) ow <- owin(xrange=range(xy[,1]), yrange=range(xy[,2])) pp <-

Dear r-helpers, I have a trouble with a package downloaded from sourceforge.net (namely the package 'kopls'). I installed it from the local zip file with the expected result > utils:::menuInstallLocal() package ?kopls? successfully unpacked and MD5 sums checked but when I tried to load it I obtained the following error message > require(kopls) Loading required package: kopls Failed