search for: oldpkgs

...quot; so to not mask the original update.packages) With much respect, Tal ############################### update.packages.2 <- function (lib.loc = NULL, repos = getOption("repos"), contriburl = contrib.url(repos, type), method, instlib = NULL, ask = TRUE, available = NULL, oldPkgs = NULL, ..., checkBuilt = FALSE, type = getOption("pkgType"), subset) { force(ask) text.select <- function(old) { update <- NULL for (k in seq_len(nrow(old))) { cat(old[k, "Package"], ":\n", "Version", old[k, "In...

...://grokbase.com/t/r/r-sig-debian/127nwwez27/package-xml-does-not-load-in-r-2-15-1>, StackOverflow<http://stackoverflow.com/questions/7765429/unable-to-install-r-package-in-ubuntu-11-04>) by running sudo apt-get install r-cran-xml. However, this is not usable with R 3.0, and update.packages(oldpkgs = 'XML') failed as well. Lastly, it is not available on the RutteR PPA<https://launchpad.net/~marutter/+archive/rrutter/+index?batch=75&direction=backwards&start=600> . Is there a way to solve this? Thanks in advance! John P.S. In case it could be helpful, here is my sessio...

It says that nser requires the most recent version of magrittr that you do not have installed. You must update magrittr before attempting to install nser: update.packages(oldPkgs = "magrittr") or at the prompt you were presented before, choose to update magrittr before installing nser. On Sun, Apr 9, 2023, 17:55 akshay kulkarni <akshay_e4 at hotmail.com> wrote: > Dear members, > I can't install "nser" packa...

Hello, All: Jonathan Baron is "giving up" maintaining the RSiteSearch database. This breaks three things: (1) The R Site Search web service that Baron has maintained. (2) The RSiteSearch function in the utils package. (3) The sos package, for which I'm the maintainer and lead author. Might someone else be willing to take these over? For me,

...ettes only, with some help from R developers and Fedora >maintainers. Here is the trick, for someone who wants to do it: > >m0 <- rownames(installed.packages()) >m1 <- m0[which(m0 %in% needed.packages)] >source("http://bioconductor.org/biocLite.R") >update.packages(oldPkgs=m1,repos=biocinstallRepos()) >update.packages(dependencies=FALSE,INSTALL_opts=c("--no-configure","--no-test-load"," >--no-R","--no-clean-on-error","--no-libs","--no-data","--no-demo","--no-exec","--html >&...

...html help files and vignettes only, with some help from R developers and Fedora maintainers. Here is the trick, for someone who wants to do it: m0 <- rownames(installed.packages()) m1 <- m0[which(m0 %in% needed.packages)] source("http://bioconductor.org/biocLite.R") update.packages(oldPkgs=m1,repos=biocinstallRepos()) update.packages(dependencies=FALSE,INSTALL_opts=c("--no-configure","--no-test-load","--no-R","--no-clean-on-error","--no-libs","--no-data","--no-demo","--no-exec","--html"),repos=b...

Dear members, I can't install "nser" package. It is not in cran but install_version and install_github both are not working: > install_version("nser",version = "1.4.0") Downloading package from url: https://cran.rstudio.com//src/contrib/Archive/nser/nser_1.4.0.tar.gz These packages have more recent versions available. It is

...lp from R developers and Fedora >>maintainers. Here is the trick, for someone who wants to do it: >> >>m0 <- rownames(installed.packages()) >>m1 <- m0[which(m0 %in% needed.packages)] >>source("http://bioconductor.org/biocLite.R") >>update.packages(oldPkgs=m1,repos=biocinstallRepos()) >>update.packages(dependencies=FALSE,INSTALL_opts=c("--no-configure","--no-test-load", >" >>--no-R","--no-clean-on-error","--no-libs","--no-data","--no-demo","--no-exec",&quot...

...ot;http://bioconductor.org/packages/3.1/data/experiment", "http://bioconductor.org/packages/3.1/extra", + "http://cran.fhcrc.org"), .Names = c("BioCsoft", "BioCann", "BioCexp", + "BioCextra", "CRAN"))) > update.packages(oldPkgs="AnnotationDbi") AnnotationDbi : Version 1.0 installed in /Library/Frameworks/R.framework.develMav/Versions/3.2/Resources/library Version 1.29.17 available at http://bioconductor.org/packages/3.1/bioc Update (y/N/c)? y also installing the dependencies ?IRanges?, ?BiocGenerics?, ?Bioba...

...for someone who wants to do it: > > m0 <- rownames(installed.packages()) > m1 <- m0[which(m0 %in% needed.packages)] > source("http://bioconductor.org/biocLite.R > <http://bioconductor.org/biocLite.R>") > update.packages(oldPkgs=m1,repos=biocinstallRepos()) > update.packages(dependencies=FALSE,INSTALL_opts=c("--no-configure","--no-test-load"," > --no-R","--no-clean-on-error","--no-libs","--no-data","--no-demo","--no-exec",...

...ra >>> maintainers. Here is the trick, for someone who wants to do it: >>> >>> m0 <- rownames(installed.packages()) >>> m1 <- m0[which(m0 %in% needed.packages)] >>> source("http://bioconductor.org/biocLite.R") >>> update.packages(oldPkgs=m1,repos=biocinstallRepos()) >>> update.packages(dependencies=FALSE,INSTALL_opts=c("--no-configure","--no-test-load", >>> >> " >>> --no-R","--no-clean-on-error","--no-libs","--no-data","--no-demo&quot...

...ing NA levels to individual factors. o unlink() tries the literal pattern if it does not match with wildcards interpreted -- this helps with e.g. unlink("a[b") which previously needed to be unlink("a\\[b"). o update.packages() gains an argument 'oldPkgs', where new.packages() and old.packages() get 'instPkgs'. These allow to consider only subsets of packages instead of all installed ones. o which(b) is somewhat faster now, notably for named vectors, thanks to a suggestion by Henrik Bengtsson. o Ne...

...ing NA levels to individual factors. o unlink() tries the literal pattern if it does not match with wildcards interpreted -- this helps with e.g. unlink("a[b") which previously needed to be unlink("a\\[b"). o update.packages() gains an argument 'oldPkgs', where new.packages() and old.packages() get 'instPkgs'. These allow to consider only subsets of packages instead of all installed ones. o which(b) is somewhat faster now, notably for named vectors, thanks to a suggestion by Henrik Bengtsson. o Ne...

...atures (including large file sizes and bzip2 compression, but not UTF-8 file names). unzip() has a new option to restore file times from those recorded (in an unknown timezone) in the zip file. o update.packages() now accepts a character vector of package names for the oldPkgs argument. (Suggestion of Tal Galili.) o The special reference class fields .self and .refClassDef are now read-only to prevent corrupting the object. o decompose() now returns the original series as part of its value, so it can be used (rather than reconstructed) when plottin...

...atures (including large file sizes and bzip2 compression, but not UTF-8 file names). unzip() has a new option to restore file times from those recorded (in an unknown timezone) in the zip file. o update.packages() now accepts a character vector of package names for the oldPkgs argument. (Suggestion of Tal Galili.) o The special reference class fields .self and .refClassDef are now read-only to prevent corrupting the object. o decompose() now returns the original series as part of its value, so it can be used (rather than reconstructed) when plottin...