search for: ochsner

Displaying 1 result from an estimated 1 matches for "ochsner".

Did you mean: ochsnet
2011 Mar 14
1
hclust() memory issue
Hi, I have a microarray dataset of dimension 25000x30 and try to clustering using hclust(). But the clustering on the rows failed due to the size: > y<-hclust(dist(data),method='average') Error: cannot allocate vector of size 1.9 Gb I tried to increase the memory using memory.limit(size=3000), still got the same error. I also tried agnes() from cluster package and pvclust() from