search for: oberdiek

...e rman, ngerman, french, loaded. ("C:\Program Files\MiKTeX 2.7\tex\latex\base\report.cls" Document Class: report 2007/10/19 v1.4h Standard LaTeX document class ("C:\Program Files\MiKTeX 2.7\tex\latex\base\size11.clo")) (compdiag.sty ("C:\Program Files\MiKTeX 2.7\tex\generic\oberdiek\ifpdf.sty") ("C:\Program Files\MiKTeX 2.7\tex\latex\graphics\graphicx.sty" ("C:\Program Files\MiKTeX 2.7\tex\latex\graphics\keyval.sty") ("C:\Program Files\MiKTeX 2.7\tex\latex\graphics\graphics.sty" ("C:\Program Files\MiKTeX 2.7\tex\latex\graphics\trig.sty&q...

In the process of updating R to R 2.7 alpha or R 2.7 beta for the BioConductor 2.2 builds on Windows, I have hit a snag because the BioC build system has long path names (e.g. D:\biocbld\bbs-2.2-bioc\R) and these path names are not resolving properly by MiKTeX 2.7 during vignette construction. Take, for example, the attached vignette from Biobase, Bioconductor.Rnw. I have built R from source

...dftex.def"))) ("d:\Program Files\MiKTeX 2.7\tex\latex\graphics\color.sty" ("d:\Program Files\MiKTeX 2.7\tex\latex\00miktex\color.cfg")) (fancyhdr.sty) ("d:\Program Files\MiKTeX 2.7\tex\latex\hyperref\hyperref.sty" ("d:\Program Files\MiKTeX 2.7\tex\generic\oberdiek\ifpdf.sty") ("d:\Program Files\MiKTeX 2.7\tex\generic\oberdiek\ifvtex.sty") ("d:\Program Files\MiKTeX 2.7\tex\generic\ifxetex\ifxetex.sty") ("d:\Program Files\MiKTeX 2.7\tex\latex\oberdiek\hycolor.sty" ("d:\Program Files\MiKTeX 2.7\tex\latex\oberdiek\xcol...

...1enc.def)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/pdftex-def/pdftex.def (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/infwarerr.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ltxcmds.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/sha...

On 29 May 2018 at 16:37, R P Herrold wrote: | On Tue, 29 May 2018, Dirk Eddelbuettel wrote: | | > On a CentOS 7 machine, I am at a loss with respect to an inability to run a | > full R CMD check as anything involving tex files ends in tears. | | Hi, Dirk | | Have fun at the upcoming conference at UIC | | I seem to have 56 font packages installed under CentOS 7 | locally, but then I work

...1enc.def)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/pdftex-def/pdftex.def (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/infwarerr.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ltxcmds.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/sha...

...e/2011/texmf-dist/tex/latex/graphics/keyval.sty)) (/usr/local/texlive/2011/texmf-dist/tex/latex/graphics/color.sty (/usr/local/texlive/2011/texmf-dist/tex/latex/latexconfig/color.cfg) (/usr/local/texlive/2011/texmf-dist/tex/latex/pdftex-def/pdftex.def (/usr/local/texlive/2011/texmf-dist/tex/generic/oberdiek/infwarerr.sty) (/usr/local/texlive/2011/texmf-dist/tex/generic/oberdiek/ltxcmds.sty))) (/usr/local/texlive/2011/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/local/texlive/2011/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/local/texlive/2011/texmf-dist/tex/generic/oberdiek/hobsub-gen...

...| (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) | (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty | (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/color.cfg) | (/usr/share/texlive/texmf-dist/tex/latex/pdftex-def/pdftex.def | (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/infwarerr.sty) | (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ltxcmds.sty))) | (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty | (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty | (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) |...

...eport 2007/10/19 v1.4h Standard LaTeX document class (/usr/local/texlive/2009/texmf-dist/tex/latex/base/size10.clo)) (/usr/local/texlive/2009/texmf-dist/tex/latex/geometry/geometry.sty (/usr/local/texlive/2009/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/local/texlive/2009/texmf-dist/tex/generic/oberdiek/ifpdf.sty) (/usr/local/texlive/2009/texmf-dist/tex/generic/oberdiek/ifvtex.sty) (/usr/local/texlive/2009/texmf-dist/tex/xelatex/xetexconfig/geometry.cfg)) No file file587f83cb.aux. *geometry auto-detecting driver* *geometry detected driver: dvips* Overfull \hbox (1.14412pt too wide) in paragraph a...

On an new install of Ubuntu 8.10 64bit, I am having trouble with make check-all checking package 'survival' and elsewhere: l.100 \fontencoding\encodingdefault\selectfont ! LaTeX Error: File `kvoptions.sty' not found. Type X to quit or <RETURN> to proceed, or enter new name. (Default extension: sty) ! Emergency stop. <read *> l.2231

...ics\graphicx.sty (c:\miktex2.9.4757\tex\latex\graphics\keyval.sty) (c:\miktex2.9.4757\tex\latex\graphics\graphics.sty (c:\miktex2.9.4757\tex\latex\graphics\trig.sty) (c:\miktex2.9.4757\tex\latex\00miktex\graphics.cfg) (c:\miktex2.9.4757\tex\latex\pdftex-def\pdftex.def (c:\miktex2.9.4757\tex\generic\oberdiek\infwarerr.sty) (c:\miktex2.9.4757\tex\generic\oberdiek\ltxcmds.sty)))) (c:\miktex2.9.4757\tex\latex\fancyvrb\fancyvrb.sty Style option: `fancyvrb' v2.7a, with DG/SPQR fixes, and firstline=lastline fix <2008/02/07> (tvz)) (c:\miktex2.9.4757\tex\latex\upquote\upquote.sty) (c:\miktex2.9.4757...

...can be had by better using the facilities provided by inputenx and making R CMD Rd2pdf insert a line to its temporary .tex file: "\input{ix-utf8enc.dfu}". The instructions are found in section 1.2 "Unicode" of the inputenx manual: http://mirror.ctan.org/macros/latex/contrib/oberdiek/inputenx.pdf I suggest that R CMD Rd2pdf automatically insert "\input{ix-utf8enc.dfu}" to its temporary .tex file when a combination of inputenx and UTF-8 is detected. The attached small patch does that. A demo package is also attached (tarball built manually, not R CMD build). It us...

.../texmf-texlive/tex/latex/pdftex-def/pdftex.def)) (/usr/share/texmf-texlive/tex/latex/hyperref/hyperref.sty (/usr/share/texmf-texlive/tex/latex/graphics/keyval.sty) (/usr/share/texmf-texlive/tex/latex/hyperref/pd1enc.def) (/etc/texmf/tex/latex/config/hyperref.cfg) (/usr/share/texmf-texlive/tex/latex/oberdiek/kvoptions.sty) Implicit mode ON; LaTeX internals redefined ) *hyperref using default driver hpdftex* (/usr/share/texmf-texlive/tex/latex/hyperref/hpdftex.def) Package hyperref Warning: Option `hyperindex' has already been used, (hyperref) setting the option has no effect on inpu...

I have several old encapsulated postscript graphics generated by R that I want to include in a LaTeX Beamer presentation so I want them in pdf. Under Ubuntu linux typing convert z.eps z.pdf (to use ImageMagick) results in a nice looking graphic but the bounding box is lost. Doing convert z.eps z.epdf results in a fuzzy image with a good bounding box. Does anyone have a nice solution?

As some of you will be aware, TeXLive 2009 was released last month having blocked updates on earlier versions since May. This has lead to a flood of updates of LaTeX packages, as a result of which the PDF manuals of R 2.10.0 and earlier will no longer build, for two separate reasons. For MiKTeX users: at least version 2.8 (the current one) has the same updates (a week or so later) and has