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2011 Apr 13
2
setting pairwise comparisons of columns
Hi,
I have a number of genes (columns) for which I want to examine pairwise
associations of genotypes (each row is an individual)...For example (see
data below), I would like to compare M1 to M2, M2 to M3, and M1 to M3 (i.e.
does ac from M1 tend to be found with bc from M2 more often than expected.)
Down stream I will be performing chi square tests for each pair.
But I am looking for a way to