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nucleaire
2006 Mar 22
2
R package for computing state path using Viterbi algorithm
Dear list,
This question is about Hidden Markov Model. Given a transition
matrix, an emission matrix and a sequence of observed symbols
(actually, nucleotide sequences, A, T, C and G), I hope to predict the
sequence of state by Viterbi algorithm. I searched R repository for
related packages. msm package has function viterbi.msm (as well as
very good document), but it only works for