Displaying 20 results from an estimated 23 matches for "nm1".
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2007 Mar 09
1
lpSolve space problem in R 2.4.1 on Windows XP
...MIP formulation to work correctly on some
very small problems (~10 variables and 25 constraints).
Here is the code for a working example:
>library(lpSolve)
>(v1=rev(1:8))
[1] 8 7 6 5 4 3 2 1
>(csv1=cumsum(as.numeric(v1)))
[1] 8 15 21 26 30 33 35 36
>(lencsv1=length(csv1))
[1] 8
>(Nm1=lencsv1-1)
[1] 7
>(Np1=lencsv1+1)
[1] 9
>ngp=3
>f.obj=c(1,1,rep(0,Nm1))
>f.int=3:Np1
>bin.con=cbind(rep(0,Nm1),rep(0,Nm1),diag(Nm1))
>bin.dir=rep("<=",Nm1)
>bin.rhs=rep(1,Nm1)
>gp.con=c(0,0,rep(1,Nm1))
>gp.dir="<="
>(gp.rhs=ngp-1)
[1] 2
>ub...
2007 Jul 12
1
sub-function default arguments
Hi.
I have defined a function, f1, that calls another function, f2. Inside f1
an intermediate variable called nm1 is created; it is a matrix. f2 takes a
matrix argument, and I defined f2 (schematically) as follows:
f2<-function(nmArg1=nm1,...){nC<-ncol(nmArg1); ... }
so that it expects nm1 as the default value of its argument. f1 is defined
(schematically) as:
f1<-function(...){result1<-f2()...
2009 Sep 20
4
correlation help
Dear group,
I have a matrix like the following:
Name Sample1 sample2 sample3 sample4 ..... sample(n)
nm1 10.5 13.5 30 31
nm2 8 11 34 29
nm3 9 10.3 27.8 35
nm(j)
I want to be able to calculate correlation between all pairs of names.
For example (nm1,nm2), (nm1,nm3), (nm1,nmj), (nm2,...
2009 Mar 13
2
Taking diff of character vectors
Hello, everybody
Say I have
nm1 <- c(rep(1,10), rep(0,10))
then I can do:
diff(nm1)
to see where I have shift in value
but what if I have
nm2 <- c(rep("SPZ8", 10), rep("SPX9", 10))
how can I produce the same ouput as diff(nm1) does, that is zeros
everywhere except for one place where SPZ8 changes to SP...
2016 Dec 20
2
colnames for data.frame could be greatly improved
...# int in range [1,5]
v2 = sample(5, N, TRUE), # int in range [1,5]
v3 = sample(round(runif(100,max=100),4), N, TRUE) # numeric e.g. 23.5749
)
cat("GB =", round(sum(gc()[,2])/1024, 3), "\n")
#GB = 0.397
colnames(DF) = NULL
system.time(nm1<-colnames(DF, FALSE))
# user system elapsed
# 22.158 0.299 22.498
print(nm1)
#[1] "col1" "col2" "col3" "col4" "col5" "col6" "col7" "col8" "col9"
### restart R
colnames <- function (x, do.NULL = T...
2004 Jun 09
1
Re: R equivalent of Splus rowVars function
...R question.
--
-- David Brahm (brahm at alum.mit.edu)
colVars <- function(x, na.rm=FALSE, dims=1, unbiased=TRUE, SumSquares=FALSE,
twopass=TRUE) {
if (SumSquares) return(colSums(x^2, na.rm, dims))
N <- colSums(!is.na(x), FALSE, dims)
Nm1 <- if (unbiased) N-1 else N
if (twopass) {x <- if (dims==length(dim(x))) x - mean(x, na.rm=na.rm) else
sweep(x, (dims+1):length(dim(x)), colMeans(x,na.rm,dims))}
(colSums(x^2, na.rm, dims) - colSums(x, na.rm, dims)^2/N) / Nm1
}
rowVars <- function(x, na.rm=FALSE,...
2016 Dec 27
0
colnames for data.frame could be greatly improved
...; v2 = sample(5, N, TRUE), # int in range [1,5]
> v3 = sample(round(runif(100,max=100),4), N, TRUE) # numeric e.g. 23.5749
> )
> cat("GB =", round(sum(gc()[,2])/1024, 3), "\n")
> #GB = 0.397
> colnames(DF) = NULL
> system.time(nm1<-colnames(DF, FALSE))
> # user system elapsed
> # 22.158 0.299 22.498
> print(nm1)
> #[1] "col1" "col2" "col3" "col4" "col5" "col6" "col7" "col8" "col9"
>
> ### restart R
>
> c...
2002 Nov 15
2
Why no colSDs etc
Hi people,
If there is a fn "colMeans" why isn't there a "colSDs" etc
Thanks,
Phil.
--
Philip Rhoades
Pricom Pty Limited (ACN 003 252 275)
GPO Box 3411
Sydney NSW 2001
Australia
Mobile: +61:0411-185-652
Fax: +61:2:8923-5363
E-mail: pri at chu.com.au
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2002 Aug 14
3
t-test via matrix operations
I need to calculate a large number of t statistics, and would like to do so via matrix operations. So far I have figured out a way to calculate the mean of each row of the matrix:
d <- matrix(runif(100000,1,10), 1000, 10) # some test data
s <- rep(1,ncol(d)) # a sum vector to use for matrix multiplication
means <- (d%*%s)/ncol(d)
This is at least 1 order of magnitude faster than
2006 Mar 31
2
rowVars
I am using the R 2.2.1 in a Windows XP environment.
I have a dataframe with 12 columns and 1,000 rows.
(Some of the rows have 1 or fewer values.)
I am trying to use rowVars to calculate the variance
of each row.
I am getting the following message:
?Error in na.remove.default(x) : length of 'dimnames'
[1] not equal to array extent?
Is there a good work-around?
2011 Oct 17
1
plotting issues with PCA
...y
colour file correctly and is only printing the first colour in the
file....code is below
site.codings <-
c(1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,2,2,2,2,2,2,2,2,2,2,2,5,4,4,4,4,4,3,3,3,6,6,6,6,6,6,6,6,5,5,5,5)
> names(site.codings) <- c( "WM1", "WM2", "WM3", "NM1", "NM2", "NM3", "KH1",
"KH2", "KH3", "LM1" ,"LM2" ,"LM3", "DB1" ,"DB2" ,"DB3", "DM1" , "DM2" ,
"DM3" , "FI1", "FI2", "BKI1"...
2002 Mar 17
5
compute variance of every column in a matrix without a loop
Is it possible to compute the variance of every column in a matrix
without a loop?
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2017 Feb 22
0
Crash in the latest release
...e4_1.1-12 Matrix_1.2-8
loaded via a namespace (and not attached):
[1] minqa_1.2.4 MASS_7.3-46 compiler_3.4.0 tools_3.4.0
[5] Rcpp_0.12.9 splines_3.4.0 nlme_3.1-131 grid_3.4.0
[9] nloptr_1.0.4 lattice_0.20-34
> startvec <- c(Asym = 200, xmid = 725, scal = 350)
> (nm1 <- nlmer(circumference ~ SSlogis(age, Asym, xmid, scal) ~ Asym|Tree,
+ Orange, start = startvec))
*** Error in `/usr/local/src/R-devel/bin/exec/R': malloc(): memory corruption: 0x0e3df988 ***
Aborted (core dumped)
---------------------
The valgrind version is interesting too:...
2017 Feb 22
0
[Lme4-authors] Crash in the latest release
...t; loaded via a namespace (and not attached):
> [1] minqa_1.2.4 MASS_7.3-46 compiler_3.4.0 tools_3.4.0
> [5] Rcpp_0.12.9 splines_3.4.0 nlme_3.1-131 grid_3.4.0
> [9] nloptr_1.0.4 lattice_0.20-34
>
>> startvec <- c(Asym = 200, xmid = 725, scal = 350)
>> (nm1 <- nlmer(circumference ~ SSlogis(age, Asym, xmid, scal) ~ Asym|Tree,
> + Orange, start = startvec))
> *** Error in `/usr/local/src/R-devel/bin/exec/R': malloc(): memory
> corruption: 0x0e3df988 ***
> Aborted (core dumped)
>
> ---------------------
>
> The...
2005 Jul 24
1
Buglet in src/appl/splines.c (PR#8030)
...patch"
Content-Transfer-Encoding: 7bit
Index: src/appl/splines.c
===================================================================
--- src/appl/splines.c (revision 35020)
+++ src/appl/splines.c (working copy)
@@ -348,6 +348,7 @@
int i, j, k, l;
double ul, dx, tmp;
+ const int nm1 = *n - 1;
if(*method == 1 && *n > 1) {
dx = x[*n - 1] - x[0];
@@ -365,7 +366,7 @@
i = 0;
for(l = 0; l < *nu; l++) {
ul = v[l];
- if(ul < x[i] || x[i+1] < ul) {
+ if(ul < x[i] || (i < nm1 && x[i+1] < ul)) {
i = 0;
j = *n;
do...
2009 Dec 09
4
binary string conversion to a vector (PR#14120)
Full_Name: Franc Brglez
Version: R 2.9.1 GUI 1.28 Tiger build 32-bit (5444)
OS: MacOSX -- 10.6.2
Submission from: (NULL) (24.148.163.114)
I am demonstrating what may be a bug or my lack of experience. Please review as
it would help to hear from someone.
MANY THANKS -- Franc Brglez
The function "binS2binV" returns what I consider a wrong value -- see the
terminal output
binS2binV =
2010 Apr 05
0
[LLVMdev] Linking with C Library
...iler. It outputs the following:
>
> 08161b00 T camlRuntime__rt_fputs_208
> 08161a20 T camlRuntime__rt_puts_198
> U fputs
>
> I'm assuming this means that fputs is linked dynamically, and puts is not.
Don't assume; ask `man nm`.
http://www.linuxcommand.org/man_pages/nm1.html says that a 'U' in that
column means "The symbol is undefined." (It's there so the dynamic
loader knows to pull it out of a .so, I think.)
You need to figure out how to pass -rdynamic to the linker, like I
said before. http://llvm.org/docs/tutorial/OCamlLangImpl7.html
me...
2010 Apr 05
2
[LLVMdev] Linking with C Library
I tried running nm - D | grep "puts" on the binary compiled by the OCaml
compiler. It outputs the following:
08161b00 T camlRuntime__rt_fputs_208
08161a20 T camlRuntime__rt_puts_198
U fputs
I'm assuming this means that fputs is linked dynamically, and puts is
not. I tried modifying my code to use fputs instead of puts instead, but
had no success, however, I still get:
2010 Jan 12
2
optimization challenge
I have a challenge that I want to share with the group.
This is not homework (but I may assign it as such if I teach the appropriate class again) and I have found one solution, so don't need anything urgent. This is more for fun to see if others can find a better solution than I did.
The challenge:
I want to read a book in a given number of days. I want to read an integer number of
2013 Sep 05
6
[PATCH 1/7] drm/nouveau: remove prototype for non-existent nouveau_connector_bpp
Signed-off-by: Ilia Mirkin <imirkin at alum.mit.edu>
---
drivers/gpu/drm/nouveau/nouveau_connector.h | 3 ---
1 file changed, 3 deletions(-)
diff --git a/drivers/gpu/drm/nouveau/nouveau_connector.h b/drivers/gpu/drm/nouveau/nouveau_connector.h
index 6e399aa..4cefce3 100644
--- a/drivers/gpu/drm/nouveau/nouveau_connector.h
+++ b/drivers/gpu/drm/nouveau/nouveau_connector.h
@@ -107,7 +107,4