Displaying 5 results from an estimated 5 matches for "nlls".
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dlls
2013 Mar 22
1
Trouble embedding functions (e.g., deltaMethod) in other functions
...r me, as a novice functioneer, to figure out what's going
wrong.
Here's my example for deltaMethod():
t <- c(0.00000, 26.24551, 61.78180, 86.88254, 221.75480)
m <- c(48.591707, 15.655895, 12.284635, 5.758547, 0.000000)
dat <- data.frame(t = t, m = m)
m0 <- m[1]
t0 <- t[5]
nlls <- nls(m ~ (m0^(1/lambda) - (t * m0/t0)^(1/lambda))^lambda,
start = list(lambda = 1), data = dat)
xVal <- seq(0, t0, length = 10)
mod.SE <- list()
for(i in 1:length(xVal)){
z <- xVal[i]
mod.SE[[i]] <- deltaMethod(nlls, "(m0^(1/lambda) - (z *
m0/t0)^(1/lambda))^lambda"...
2013 Apr 06
1
Plotting a curve for a Holling Type III Functional Response
Hey,
So I have a scatter plot and I am trying to plot a curve to fit the data
based on a Holling Type III functional response. My function is this:
nll2<-function(a,b) {
conefun<-(a*DBH^2)/(b^2+DBH^2)
nlls2<-dnbinom(x=cones ,size=DBH, mu=conefun,log=TRUE)
-sum(nlls)
}
and my plot is this:
plot (DBH,cones)
DBH is on the x-axis and cones is on the y-axis. How do I get the curve for
my function onto the scatterplot?
--
View this message in context: http://r.789695.n4.nabble.com/Plotting-a-cu...
2007 Jan 10
2
problems with optim, "for"-loops and machine precision
...e complex model with 7 parameters (two of these parameters
are equal in the 6-parameter model) by minimizing the corresponding NLL with
"optim". In theory the 7-parameter model should fit the data either equally
or better than the 6-parameter model. Therefore the difference of the
minimal NLLs should be 0 or larger.
For 500 data sets I use the following code:
require(odesolve)
res=matrix(nrow=500,ncol=18)
colnames(res)=c("a_23","beta_23","mu_23","d_23","I_23","M_23","NLL_23",
"a_21","...
2008 Mar 13
11
Testing wanted: OpenSSH 4.8
Hi,
We are preparing to make the release of OpenSSH 4.8 soon, so we would
greatly appreciate testing of snapshot releases in as many environments
and on as many operating systems as possible.
The highlights of this release are:
* Added chroot(2) support for sshd(8), controlled by a new option
"ChrootDirectory". Please refer to sshd_config(5) for details, and
please use this
2004 Aug 25
3
Beginners Question: Make nlm work
Hello,
I'm new to this and am trying to teach myself some R by plotting
biological data. The growth curve in question is supposed to be fitted
to the Verhulst equation, which may be transcribed as follows:
f(x)=a/(1+((a-0.008)/0.008)*exp(-(b*x)))
- for a known population density (0.008) at t(0).
I am trying to rework the example from "An Introduction to R" (p. 72)
for my case and