Displaying 1 result from an estimated 1 matches for "newseqexpressionset".
2015 Feb 18
0
smoothScatter() and the KernSmooth package
...ExpressionSet,numeric-method
> ### Keywords: methods
>
> ### ** Examples
>
> library(yeastRNASeq)
> data(geneLevelData)
> data(yeastGC)
>
> sub <- intersect(rownames(geneLevelData), names(yeastGC))
>
> mat <- as.matrix(geneLevelData[sub,])
>
> data <- newSeqExpressionSet(mat,
+ phenoData=AnnotatedDataFrame(
+ data.frame(conditions=factor(c("mut", "mut",
"wt", "wt")),
+ row.names=colnames(geneLevelData))),
+ featureData=AnnotatedDataFrame(data.frame...