search for: neurobiologi

Displaying 20 results from an estimated 31 matches for "neurobiologi".

Did you mean: neurobiology
2008 Apr 05
1
bug? nlme 3.1-88 compilation under linx
>From http://bugs.r-project.org/cgi-bin/R: If you are not sure whether you have observed a bug or not, it is a good idea to ask on the mailing list R-Help by sending an e-mail to r-help at stat.math.ethz.ch rather than submitting a bug report. I'm wondering whether to submit a bug report on this: ============================================================== >
2010 Sep 14
2
How to uncompress a gz file in R
Dear Fellows, I would like to know how to uncompress a gz file at the R console. I could not find out any help from the R-help archive. Thanks for your great help. Best Regards, Wonsang You ----- -- Wonsang You Special Lab Non-Invasive Brain Imaging Leibniz Institute for Neurobiology http://www.ifn-magdeburg.de -- View this message in context:
2010 Sep 16
2
How to combine matrix and vector
Dear fellows, I am a novice in R. I would like to combine a matrix and a vector. Assume that we have the matrix a and the vector b with same length of column. a<-matrix(seq(1:10),nrow=2,ncol=5,byrow=TRUE) a= 1 2 3 4 5 6 7 8 9 10 b<-t(c(11,12,13,14,15)) b= 11 12 13 14 15 Then, I want to combine a and b as follows. c= 1 2 3 4 5 6 7 8 9
2019 May 29
3
Making a package CITATION file from BibTeX
Dear Colleagues, I would like to provide a CITATION file for my package nat.nblast [1]. I have the correct citation in BibTeX format [2]. How can I convert this BibTeX to the format needed by R for a package CITATION file (I have a lot of other packages needing citations ...). I think what I need is the opposite of RefManageR::toBiblatex [3]. This seems like it should be a common need, so I
2010 Oct 13
2
How to fix error in the package 'rgenoud'
Dear R user fellows, I would like to ask you about the package 'rgenoud' which is a genetic optimization tool. I ran the function 'genoud' with two variables to be minimized by the following command. result<-genoud(fn,nvars=2,starting.values=c(0.5,0), pop.size=1000, max.generations=10, wait.generations=3) Then, I had the following error message. Error in
2006 May 11
1
Comparing skewness
Hello, I'd appreciate any ideas on how to compare the skewness of two samples. In my case, one sample is likely to be roughly normal and the other one skewed. I could run two D'Agostino tests, but then I'll have to correct for the family-wise error. What if both samples are skewed? If there are no general tests (or they can't exist), I'd like to know. Thanks, Skirmantas
2011 Feb 08
1
Simulation of Multivariate Fractional Gaussian Noise and Fractional Brownian Motion
Dear R Helpers, I have searched for any R package or code for simulating multivariate fractional Brownian motion (mFBM) or multivariate fractional Gaussian noise (mFGN) when a covariance matrix are given. Unfortunately, I could not find such a package or code. Can you suggest any solution for multivariate FBM and FGN simulation? Thank you for your help. Best Regards, Ryan ----- Wonsang You
2011 Feb 26
1
2D Convolution Function
Dear R-Helpers, I want to try the 2D (two-dimensional) convolution in R. For example, let us we have the following kernel and data. kernel <- (1,2,3,2,1) data <- array(1:100, dim=c(10,10)) I know the function 'convolve' only for one-dimensional convolution, but it is just for a 1D sequence. Is there any function for 2D convolution? For theory, please refer to the following link:
2011 Dec 06
1
Read Windows BMP format images
Hello, Does anyone know of an R package that can read Windows BMP format images? Many thanks, Greg Jefferis. -- Gregory Jefferis, PhD Division of Neurobiology MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK. http://www2.mrc-lmb.cam.ac.uk/group-leaders/h-to-m/g-jefferis
2010 Aug 31
4
How to Adaptively Set Up the Coordinate Range of Multiple Graphs in One Figure
Hi, R-Helpers, I would like to ask about multiple graphs in one figure. I tried to execute the following codes. xlim <- c(1,100) ylim <- c(1,4) plot(NA, xlim=xlim, ylim=ylim) > x <- c(1:100) for(j in seq(1,10,by=1)) { y <- j*x^2+log(j) lines(x, y) } In the above codes, I had to arbitrarily set up the coordinate range of the figure in advance before
2000 Aug 28
2
is win.print() broken or am I doing something wrong?
I am trying to print a graph > plot(y=atestplot$b,x=atestplot$a, type="s") > win.print() This leads to a windows print dialog box- that diappears when i hit print. subquently i find a "GraphAppJob" of zero size in the print queue- this just sits until I enter dev.off() at which point a blank sheet is printed Is it me or is this a bug? Incidentally if i just
2010 Nov 22
3
Fast Two-Dimensional Optimization
Dear R Helpers, I have attempted "optim" function to solve a two-dimensional optimization problem. It took around 25 second to complete the procedure. However, I want to reduce the computation time: less than 7 second. Is there any optimization function in R which is very rapid? Best Regards, Wonsang ----- Wonsang You Leibniz Institute for Neurobiology -- View this message in
2011 Feb 02
1
Error of 'memory not mapped' in ff Package with VirtualBox
Dear R Helpers, I would like to report on an error in the ff package here. The ff package is an R package which enables us to store large data on disk systematically and have fast access to the database. I used the package in Linux as a guest OS of VirtualBox, and executed the following commands. library(ff)
2007 Apr 12
1
Assignment from list
I have a list of groups of xy positions I want to set to 0 in an array full of 1s. When the assignments are done directly from the list, they are incorrect, while if I use a temporary array derived from the list the assignments are correct. The following example will hopefully make my problem clearer. The matrices z and zz are initialised with 1. The z and zz values at coordinates in
2014 Nov 10
1
subscripting a data.frame (without changing row order) changes internal row.names
Dear R-devel, Can anyone help me to understand this? It seems that subscripting the rows of a data.frame without actually changing their order, somehow changes an internal representation of row.names that is revealed by e.g. dput/dump/serialize I have read the docs and inspected the (R) code for data.frame, rownames, row.names and dput without enlightenment. df=data.frame(a=1:10, b=1)
2002 Nov 11
2
R 1.6.1: help with debugging error in RunGenCollect(), R_gc_internal
Hi, [System info: R 1.6.1 compiled from source (no args to configure) on Redhat 7.1 Linux i/386] I have some spatial statistics programs that recently (since R 1.6.1) have generated SIGSEGV. These R programs use the splancs library as well as some C code of my own for Voronoi analysis. The program has a big loop to fit various model parameters against a spatial distribution of biological
2000 Aug 24
0
Is there a method to calculate Huynh and Feldt adjustments for sphericity violations
Hi, I'm getting to grips with using R to perform repeat measures analysis of variance and was wondering is there a potted method to obtain Huynh and Feldt or other adjustments for sphericity violations? Thanks Dominic Dr Dominic J Barraclough Dept Neurobiology and Anatomy, University of Rochester, 601 Elmwood Av, Box 603, Rochester NY 14642 tel (716) 2753627 dominic_barraclough at
2010 May 10
0
Plotting residuals from a sem object
R experts - I'm using John Fox's sem package to analyze a simple path model (two correlated predictor variables directly influencing a single criterion variable): Predictor1 -> Criterion Predictor2 -> Criterion Predictor1 <-> Predictor2 I'm giving a presentation on this material next week, and I'd like to use component-residual plots (i.e., partial residual plots)
1999 Jan 25
0
Long password
Hi I have a couple of days seen a discussion about long password >8 chars, the new samba server 2.0.0 and HP-UX 10.20. I worked without any problems at the old samba server vers 1.9.19p8. Has anybody found a solution so you will be able to use these passwords with more than 8 characters at the new vers 2.0.0? Regards, Claus Svarer --- -
2012 Jul 06
0
depends/suggests when making a new generic to override a function in a user package
Dear R developers, I would like to add a new S3 generic to override a function in a user package, specifically: STAR::as.repeatedTrain I have followed the recommendation here: http://cran.r-project.org/doc/manuals/R-exts.html#Adding-new-generics doing this: as.repeatedTrain<-function(x,...){ UseMethod("as.repeatedTrain") } as.repeatedTrain.default<-function(x,...) {