search for: nclusters

Dear all, I can't get the labels slot in ICLUST to accept a character vector. library(psych) test.data <- Harman74.cor$cov ic.out <- ICLUST(test.data,nclusters =4,labels=letters[1:ncol(test.data)]) ##?Error in !labels : invalid argument type ic.out <- ICLUST(test.data,nclusters =4,labels=1:ncol(test.data)) ## OK Any ideas?

...t; > I am writing some code to generate a function. I am passing that code to a > dataset which i'm importing in R, e.g. > Test=read.table('C:/test.txt', header=F, sep='\t', na.strings='NA', dec='.', > strip.white=TRUE) > Test > > V1 > (if(nclusters>0){OptmizationInputs[3,3]*beta[1]}else{0})+" > (if(nclusters>1){OptmizationInputs[3,3]*beta[1]}else{0})+" > V1 has inside a code for a function. > > I'm having problems with 2 things: > > 1 - I need to take out from V1 all " that appears in the text, i tri...

Hi to everyone, I'm a PhD student and I'm involved in non parametric analyses of hierarchical models. I tried to use package DPpackage on my data, but I encountered some problems in interpreting ouputs. Can anybody help me? The problem can be remued as follows: I have a logit hierarchical model for survival (i.e. binary response) in patients affected by heart failure (the court

Hello, All, GWAF 1.2 R.Version() is below. system(lme.batch.imputed( phenfile = 'phenfile.csv', genfile = 'CARe_imputed_release.0.fhsR.gz', pedfile='pedfile.csv', phen='phen1', covar=c('covar1','covar2'), kinmat='imputed_fhs.kinship.RData', outfile='imputed.FHS.IBC.GWAF.LME.output.0.txt' )) Gives the error messages: Error in

I'm using /parApply/() function in "snow" package for parallel computing (boostrapping repeating calculation), as the follows: MyBoostrapping <- function( i ){ ..... } cl <- makeCluster( ncluster, type = "SOCK") i.circle <- as.matrix( 1:128, , 1) parApply( cl, i.circle, 1, FUN = MyBoostrapping) It works. However, I want to set more than one arguments to

...e 'clValid' ** Removing '/Users/guybrock/Documents/projects/DattaPackages/Cluster/clValid_0.5-4.Rcheck/clValid' The NAMESPACE file is below, .onLoad <- function(lib, pkg) require(methods) importFrom(graphics, plot) exportClasses(clValid) exportMethods(clusters, clusterMethods, nClusters, measNames, measures, optimalScores, plot, print, show, summary) S3method(print,sota) S3method(plot,sota) export(clValid, sota, dunn, connectivity, BHI, BSI, stability, matchGO) My question is - how can I locate the source of the cyclic dependency error? This is an updated version of a package wh...

Dear R-help, Let me know if I should email r-devel instead of this list. This message is addressed to Professor Lumley or anyone familiar with the survey package. Does svycoxph() implement the method outlined in Binder 1992 as referenced in the help file? That is, are weights incorporated in the ratio term (numerator and denominator) of the estimating equation? I don't believe so since

I am making the question clear. Please help. > Dear R experts > > I was using kinship package to fit mixed model with kinship matrix. > The package looks like lme4, but I could find a way to extract p-value > out of it. I need to extract is as I need to analyse large number of > variables (> 10000). > > Please help me: > > require(kinship) > > #Generating

...uot;, header=TRUE)abh <- read.table("G:/Data_Files/SPSS Files/abh.csv", sep=";", header=TRUE)m <- as.matrix(unabh)attach(abh)rmt1 <- regmix(m, VVV, ir=1, nclus=1:2,icrit=1.e-5, minsig=1.e-6, warning=TRUE)write.table(rmt1$g) this is just an example i have tried other nclusters and without the warning=TRUE and without any instruction beyond the variables but when trying more clusters he never stops calculating (maybe there are too many respondents r.b. 4000 ???) my objective: i want a couple of meaningful clusters with meaningful regressions does anybody know what...

When trying to installing Syslinux on a FAT32 drive formatted using Ridgecrop's Large FAT32 formatting tool [1], the installer will bail due to the minfatsize check, as there is an extra sector being used. This fix addresses that. [1] http://www.ridgecrop.demon.co.uk/index.htm?fat32format.htm -------------- next part --------------

...irmed new volume has a secondary FAT32 boot sector Setting secondary FAT32 boot sector for boot... Setting Label (This may take while)... Format completed. Writing master boot record... (...) Installing Syslinux 6.03... Opened drive \\?\Volume{00466cbf-0000-0000-0000-100000000000} for write access nclusters = 3051903 fat_type = FAT28, LIBFAT_SECTOR_SHIFT = 9 minfatsize = 23843 (patched, after shift) fatsize = 23843 Successfully wrote Syslinux boot record ----------------------------------------------------------------------- If minfatsize wasn't patched (original Syslinux code) it would be...

...ector > Setting secondary FAT32 boot sector for boot... > Setting Label (This may take while)... > Format completed. > Writing master boot record... > (...) > Installing Syslinux 6.03... > Opened drive \\?\Volume{00466cbf-0000-0000-0000-100000000000} for write > access > nclusters = 3051903 > fat_type = FAT28, LIBFAT_SECTOR_SHIFT = 9 > minfatsize = 23843 (patched, after shift) > fatsize = 23843 > Successfully wrote Syslinux boot record > ----------------------------------------------------------------------- > > If minfatsize wasn't patched (o...