search for: ncf

Hi, I'm doing cross-correlation correlograms with the ncf package. I have four study sites ; four correlograms. I'd like to get the same y scale for the four of them... only, using "ylim=c(-1,1)" does not change the y scale never and I don't know why. I tried with plot() too. Is there another option to change the ylim in plots ? Exam...

...d from reading online it seems like it is comparable to a SQL group by to perform summary functions. I am looking to do a summary function, such as SUM/MIN, but instead of these basic functions, I would like to calculate the IRR. Assuming I have a data set DS01: FirstName LastName NCF Date A B -100 1/1/2001 A B 50 2/1/2002 A B 200 3/1/2003 A C -500...

Group, I'm currently trying to find out how the function correlog in the ncf package may be useful to me for calculating cross-correlograms. The function's output includes P-values for all distance classes, but it seems that only positive values can become significant. Is this true and correct? If so, why? Thanks in advance. Ren? Eschen. _____________________________...

Dear all, I'm calculating matrix correlations with permutation tests and I got this funny result. All correlation coefficients are the same with mantel.test {ncf} and pcol {simba} but the two functions yield dramatically different p-values (using the same number of permutations). Could anyone please enlighten me what is causing the difference and which result I can trust? (My matrices are not hdist objects so please don't recommend using mantel.rtes...

...ven't had this bite them. Also, shouldn't rsync continue with the other files that *do* fit into the destination, rather than dying on the first one that doesn't fit? Perhaps we need an --ignore-errors-even-further option... -- -IAN! Ian! D. Allen Ottawa, Ontario, Canada idallen@ncf.ca Home Page on the Ottawa FreeNet: http://www.ncf.ca/~aa610/ College professor at: http://www.algonquincollege.com/~alleni/ Board Member, TeleCommunities CANADA http://www.tc.ca/

I would like to perform partial mantel tests on only within group values, with "between group" values assigned to NA. This is possible in package ncf partial.mantel.test, however this sues a different permutation to that used in ecodist.ecodist will not accept data with NA values, returning a "matrix is not square error. is it possible to perform this test in ecodist? many thanks Nevil Amos > library(ecodist) > library(ncf) > x...

...ble, but that is likely my next step. Your assistance is greatly appreciated. ### Here is the relevant portion of the R script: # load R libraries library(ncdf) library(maps) library(fields) # file path gcfilename <- "/users/me/MEGANv2.04/Output/latlong_spec2_WOCONV_150s_2004187.ncf" gcfilename.ori <- "/users/me/MEGANv2.04/Output/latlong_spec2_WOCONV_2001187.ncf" # ---------------- # Open file # ---------------- nc <- open.ncdf(gcfilename) nc.ori <- open.ncdf(gcfilename.ori) print ("fininshed open file") print(nc)...

...** Suffice to say, there is no "/usr/local/lib/dovecot/auth/password". I'm guessing that the dovecot auth-worker process is failing for the same reason but I don't know how to debug that one. I have core files for the dovecotpw process. -- Andr? Dalle Systems Administrator NCF Internet

...to overlay. I can do this by cruder means, but would prefer to know how to do this in lattice/rasterVis or similar (or ggplot/ggmap). Two nearly-self-contained examples follow. The data, ozone_lcc.nc, comes with CRAN package=M3 ... except that M3 supplies it as system.file("extdata/ozone_lcc.ncf", package="M3") and that extension currently causes problems for CRAN package=raster. You can either rename that file (and put it some current working directory), or you can download (270 kB) https://bitbucket.org/tlroche/mozart-global-to-aqmeii-na/downloads/ozone_lcc.nc You can t...

-------- Original Message -------- Subject: ***HTML***R help Date: Sat, 30 Aug 2008 14:30:48 +0530 From: sayeed hussain <sayeedhussain19 at gmail.com> To: ff809 at ncf.ca Hello there I am stuck with a problem and I need help --------------------------- R has a defined function sum() I by chance defined a function with same name sum<-function(type='public') { ....... } and now I m not able to get rid of my sum() fuction. Every time i use sum() my...

Hello ext3-users, We have a RH71 machine running 2.4.16 kernel with e2fsprogs 1.25. I noticed many of these errors in our logs. EXT3-fs error (device sd(8,1)): ext3_readdir: bad entry in directory #884828: directory entry across blocks - offset=0, inode=404600689, rec_len=23080, name_len=59 EXT3-fs error (device sd(8,1)): ext3_readdir: bad entry in directory #966714: rec_len % 4 != 0 -

...the stories about the "stable" 2.4.x kernels. Everywhere I read people saying "not for production use". Would you recommend adding ext3 to 2.2.19 (ext3-0.0.7a) or moving to 2.4.1x and using ext3 there (ext3-0.9.12)? -- -IAN! Ian! D. Allen Ottawa, Ontario, Canada idallen@ncf.ca Home Page on the Ottawa FreeNet: http://www.ncf.ca/~aa610/ College professor at: http://www.algonquincollege.com/~alleni/ Board Member, TeleCommunities CANADA http://www.tc.ca/

hello, It's the first time I post some thing in this forum. I am using rsync over Netware 6.5 to syncing 20 Novell servers. My wan conection is 2 Mb and I run rsync at night when traffic is very low. I use the following parameters: rsincstp.ncf sys:rsync/rsyncdn Rsync172.17.X.Y:873 rsyncstr.ncf sys:rsync/rsyncst sys:rsync/rsync --progress --address=172.17.X.Y --port=873 --daemon --config=sys:etc/rsyncd.conf rsyncd.conf uid = nobody gid = nobody max connections = 0 syslog facility = local5 # Chan...

...message. "cat /proc/mounts" shows root is still ext2. I tried adding "rw" to the grub boot line; that caused the boot to die in fsck being unable to check the root. Please point me at the FAQ for this one? Merci! -- -IAN! Ian! D. Allen Ottawa, Ontario, Canada idallen@ncf.ca Home Page on the Ottawa FreeNet: http://www.ncf.ca/~aa610/ College professor at: http://www.algonquincollege.com/~alleni/ Board Member, TeleCommunities CANADA http://www.tc.ca/

...ause, when Unix sends the file name with underscores back to Win98SE it has no file by that name. Why am I getting only partial translation to latin-1? Pointers to more man pages graciously accepted... # rpm -q samba samba-2.2.3a-10mdk -- -IAN! Ian! D. Allen Ottawa, Ontario, Canada idallen@ncf.ca Home Page on the Ottawa FreeNet: http://www.ncf.ca/~aa610/ College professor at: http://www.algonquincollege.com/~alleni/ Board Member, TeleCommunities CANADA http://www.tc.ca/

...ame locations. I have reason to believe that the relationships between predators and prey varies with spatial scale (nested processes). To test this hypothesis, I'd like to generate subsets of the points that are separated by distance ranges (1-50 km, 51-100 km, etc) so I can run Sncf (package ncf) on the subsets. I cannot find a way to do this with R code. Getting a distance matrix is easy. Using that to help generate a series of distance-based subsets is something I cannot figure out (without manually entering a list of all the point pairs). Any suggestio...

Hi RedHat 7.2, ext3 on /, kernel 2.4.18p1. whilst updatedb was running, i had these messages appear... Jan 6 22:18:42 jaguar kernel: EXT3-fs error (device ide0(3,3)): ext3_readdir: bad entry in directory #147553: rec_len %% 4 != 0 - offset=0, inode=1651076143, rec_len=19527, name_len=85 Jan 6 22:18:42 jaguar kernel: EXT3-fs error (device ide0(3,3)): ext3_readdir: bad entry in directory

I would like to get some opinions on a backup method using rsync. I already have a script written to mirror the data over to a backup script from a cron that is run every night. I've also been tempted to use the "--delete" option to keep everything up to date on the backup server. However, this is probably a bad idea in the event my data is deleted from the "/home"

...ke it into the kernel at all? How can we know? Could the web page be updated to contain the information about in which kernel version the listed patches have actually been applied? Merci and thank you to all doing this excellent work. -- -IAN! Ian! D. Allen Ottawa, Ontario, Canada idallen@ncf.ca Home Page on the Ottawa FreeNet: http://www.ncf.ca/~aa610/ College professor at: http://www.algonquincollege.com/~alleni/ Board Member, TeleCommunities CANADA http://www.tc.ca/

...ar relationship between biomass density and bottom depth. Hence my interest in GAMs. Predictors of primary interest are lake (factor) and bottom depth (continuous). The fish data are autocorrelated at varying ranges, depending on species and year. I've tested this using correlog (package ncf) The bottom depth data are also highly autocorrelated. Because of the autocorrelations in data, autocorrelations in GAM residuals (up to 20 lags in some cases), patterns in residual plots from GAM models, and very narrow confidence intervals for the predictions, I feel that GAM results are bia...