search for: nb1

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2012 Jul 13
1
Vuong test
Dear All, I am using the function vuong from pscl package to compare 2 non nested models NB1 (negative binomial I ) and Zero-inflated model. NB1 <-  glm(, , family = quasipoisson), it is an object of class: "glm" "lm" zinb <- zeroinfl( dist = "negbin") is an object of class: "zeroinfl"   when applying vuong function I get the following: vuong...
2006 Jun 12
1
variance specification using glm and quasi
Hi all, Cameron and Trivedi in their 1998 Regression Analysis of Count Data refer to NB1 and NB2 NB1 is the negative binomial model with variance = mu + (alpha * mu^1) yielding (1+alpha)*mu NB2 sets the power to 2; hence, variance = mu + (alpha*mu^2) I think that NB2 can be requested via negbin2<-glm(hhm~sex+age,family=quasi(var="mu^2",link="log")...
2025 Jan 06
2
Possible bug in direct.evidence.plot?
...tement with the following: if (inherits(x,"netmeta")) ... HTH, Eric On Mon, Jan 6, 2025 at 9:57?AM Miland Joshi <miland_j at hotmail.com> wrote: > I succeeded in getting netmetabin to work, but when trying to use > direct.evidence.plot I ran into a problem: > > > nb1evid <- direct.evidence.plot(nb1) > Error in if (class(x) != "netmeta") { : the condition has length > 1 > > I tried updating netmeta and dmetar (and dmetafor) from R, but the problem > remains. > Has anyone come across this, and could it be a bug? > > Regards &g...
2005 Jan 30
1
New user...tips for spdep
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2010 Nov 15
1
comparing levels of aggregation with negative binomial models
Dear R community, I would like to compare the degree of aggregation (or dispersion) of bacteria isolated from plant material. My data are discrete counts from leaf washes. While I do have xy coordinates for each plant, it is aggregation in the sense of the concentration of bacteria in high density patches that I am interested in. My attempt to analyze this was to fit negative binomial
2004 Jun 15
1
AIC in glm.nb and glm(...family=negative.binomial(.))
...ferent when using glm.nb and glm with a negative.binomial family, from the MASS library? I'm using R 1.8.1 with Mac 0S 10.3.4. >library(MASS) > dfr <- data.frame(c=rnbinom(100,size=2,mu=rep(c(10,20,100,1000),rep(25,4))), + f=factor(rep(seq(1,4),rep(25,4)))) > AIC(nb1 <- glm.nb(c~f, data=dfr)) [1] 1047 > AIC(glm(c~f, family=negative.binomial(nb1$theta), data=dfr)) [1] -431804 Actually, the difference is already apparent with the function logLik, but I still would like to understand the difference in what is calculated in the two instances. Thank you, in...
2025 Jan 06
0
Possible bug in direct.evidence.plot?
This is as I expected. My suggested fix will work in this case. On Mon, Jan 6, 2025 at 1:03?PM Miland Joshi <miland_j at hotmail.com> wrote: > Hello > > In R when I looked at the class of nb1 I got: > > class(nb1) > [1] "netmetabin" "netmeta" > > which suggests that netmeta might work but netmetabin may cause problems. > I'll notify Mathias Harrer! > > BW > Miland > > ------------------------------ > *From:* Eric Berger <eri...
2025 Jan 05
1
Possible bug in direct.evidence.plot?
I succeeded in getting netmetabin to work, but when trying to use direct.evidence.plot I ran into a problem: > nb1evid <- direct.evidence.plot(nb1) Error in if (class(x) != "netmeta") { : the condition has length > 1 I tried updating netmeta and dmetar (and dmetafor) from R, but the problem remains. Has anyone come across this, and could it be a bug? Regards Miland Joshi [[alternative HTML v...
2008 Aug 12
7
Between the values
Hi R, This is a very trivial one.... C=0.1 I want to check whether my value of C is between 0 and 1 exclusively.... I don't want to use (C>0 & C<1). And I can't use a single statement like (0<C<1). Is there a between function? Or how do we specify from 0 to 1? Does %in% help me? Many Thanks, Shubha This e-mail may contain confidential and/or
2014 Sep 19
2
negative auth cache?
I am using Dovecot 2.2.13, which doesn't yet seem to have the $auth_cache_negative parameter. Should the negative cache value honor $auth_cache_ttl then? I had a problem where some of our ldap systems were reinitialized. Some users, presumably those who tried to login while their records were returning a failure, became unable to login after the records were once again returning normally. I
2004 Jan 05
1
slow and max connection errors
...th = /var/spool/samba browseable = no # Set public = yes to allow user 'guest account' to print guest ok = no writable = no printable = yes [shared] browseable = yes wide links = no printable = no writeable = yes path = /mnt/drbd/nb1/shared force create mode = 750 comment = Shared Files valid users = swashington,dwheeling,beaster,bfitch,breynoso,bwatson,cbowen,csanford,dg oldfluss,dhuscher,dkalutkiewicz,dmauz,dmcintosh,dschneider,dtinsley,dwhe eling,dyoung,gblack,gbonner,gfriedman,gmarciniak,imoor...
2007 Apr 10
1
When to use quasipoisson instead of poisson family
It seems that MASS suggest to judge on the basis of sum(residuals(mode,type="pearson"))/df.residual(mode). My question: Is there any rule of thumb of the cutpoiont value? The paper "On the Use of Corrections for Overdispersion" suggests overdispersion exists if the deviance is at least twice the number of degrees of freedom. Are there any further hints? Thanks. -- Ronggui
2006 Dec 01
0
[PATCH 3/10] Add support for netfront/netback acceleration drivers
...1 + +/* x86/32 guests: simulate full 4GB segment limits. */ +#define VMASST_TYPE_4gb_segments 0 + +/* x86/32 guests: trap (vector 15) whenever above vmassist is used. */ +#define VMASST_TYPE_4gb_segments_notify 1 + +/* + * x86 guests: support writes to bottom-level PTEs. + * NB1. Page-directory entries cannot be written. + * NB2. Guest must continue to remove all writable mappings of PTEs. + */ +#define VMASST_TYPE_writable_pagetables 2 + +/* x86/PAE guests: support PDPTs above 4GB. */ +#define VMASST_TYPE_pae_extended_cr3 3 + +#define MAX_VMASST_TYPE...
2008 Jun 30
4
Rebuild of kernel 2.6.9-67.0.20.EL failure
Hello list. I'm trying to rebuild the 2.6.9.67.0.20.EL kernel, but it fails even without modifications. How did I try it? Created a (non-root) build environment (not a mock ) Installed the kernel.scr.rpm and did a rpmbuild -ba --target=`uname -m` kernel-2.6.spec 2> prep-err.log | tee prep-out.log The build failed at the end: Processing files: kernel-xenU-devel-2.6.9-67.0.20.EL Checking